TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support. - Thanasis Vergoulis; Ioannis S. Vlachos; Panagiotis Alexiou; George Georgakilas; Manolis Maragkakis; Martin Reczko; Stefanos Gerangelos; Nectarios Koziris; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2012)

DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways. - Ioannis S. Vlachos; Nikos Kostoulas; Thanasis Vergoulis; Georgios K. Georgakilas; Martin Reczko; Manolis Maragkakis; Maria D. Paraskevopoulou; Kostantinos Prionidis; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2012)

DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs. - Maria D. Paraskevopoulou; Georgios K. Georgakilas; Nikos Kostoulas; Martin Reczko; Manolis Maragkakis; Theodore M. Dalamagas; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2013)

DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows. - Maria D. Paraskevopoulou; Georgios K. Georgakilas; Nikos Kostoulas; Ioannis S. Vlachos; Thanasis Vergoulis; Martin Reczko; Christos Filippidis; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2013)

MirPub v2: Towards Ranking and Refining miRNA Publication Search Results. - Ilias Kanellos; Vasiliki Vlachokyriakou; Thanasis Vergoulis; Georgios K. Georgakilas; Yannis Vassiliou; Artemis G. Hatzigeorgiou; Theodore Dalamagas 001 (TPDL, 2015)

mirPub: a database for searching microRNA publications. - Thanasis Vergoulis; Ilias Kanellos; Nikos Kostoulas; Georgios K. Georgakilas; Timos K. Sellis; Artemis G. Hatzigeorgiou; Theodore Dalamagas 001 (Bioinform., 2015)

DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA: mRNA interactions. - Ioannis S. Vlachos; Maria D. Paraskevopoulou; Dimitra Karagkouni; Georgios K. Georgakilas; Thanasis Vergoulis; Ilias Kanellos; Ioannis-Laertis Anastasopoulos; Sofia Maniou; Konstantina Karathanou; Despina Kalfakakou; Athanasios Fevgas; Theodore Dalamagas 001; et al. (Nucleic Acids Res., 2015)

DIANA-miRPath v3.0: deciphering microRNA function with experimental support. - Ioannis S. Vlachos; Konstantinos Zagganas; Maria D. Paraskevopoulou; Georgios K. Georgakilas; Dimitra Karagkouni; Thanasis Vergoulis; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2015)

DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators. - Georgios K. Georgakilas; Ioannis S. Vlachos; Konstantinos Zagganas; Thanasis Vergoulis; Maria D. Paraskevopoulou; Ilias Kanellos; Panayiotis Tsanakas; Dimitris Dellis; Athanasios Fevgas; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2016)

DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts. - Maria D. Paraskevopoulou; Ioannis S. Vlachos; Dimitra Karagkouni; Georgios K. Georgakilas; Ilias Kanellos; Thanasis Vergoulis; Konstantinos Zagganas; Panayiotis Tsanakas; Evangelos Floros; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2016)

DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data. - Ioannis S. Vlachos; Thanasis Vergoulis; Maria D. Paraskevopoulou; Filopoimin Lykokanellos; Georgios K. Georgakilas; Penny Georgiou; Serafeim Chatzopoulos; Dimitra Karagkouni; Foteini Christodoulou; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2016)

DiS-TSS: An Annotation Agnostic Algorithm for TSS Identification. - Dimitris Grigoriadis; Nikos Perdikopanis; Georgios K. Georgakilas; Artemis G. Hatzigeorgiou (IWBBIO, 2020)

Conventional and machine learning approaches as countermeasures against hardware trojan attacks. - Konstantinos Liakos; Georgios K. Georgakilas; Serafeim P. Moustakidis; Nicolas Sklavos 001; Fotis C. Plessas (Microprocess. Microsystems, 2020)

Hardware Trojan Classification at Gate-level Netlists based on Area and Power Machine Learning Analysis. - Konstantinos G. Liakos; Georgios K. Georgakilas; Fotis C. Plessas (ISVLSI, 2021)

DIANA-miRGen v4: indexing promoters and regulators for more than 1500 microRNAs. - Nikos Perdikopanis; Georgios K. Georgakilas; Dimitris Grigoriadis; Vasileios Pierros; Ioannis Kavakiotis; Panagiotis Alexiou; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2021)

DeepTSS: multi-branch convolutional neural network for transcription start site identification from CAGE data. - Dimitris Grigoriadis; Nikos Perdikopanis; Georgios K. Georgakilas; Artemis G. Hatzigeorgiou (BMC Bioinform., 2022)

A Soft Sensing Approach for Efficient Monitoring of Nanobody-Based Scorpion Antivenom Production. - Juan C. Acosta-Pavas; David Camilo Corrales; Irene Martínez-Menéndez; Susana María Alonso Villela; Balkiss Bouhaouala-Zahar; Georgios K. Georgakilas; Konstantinos Mexis; Stefanos Xenios; Theodore Dalamagas 001; Antonis Kokosis; Michael O'donohue; Luc Fillaudeau; et al. (DCAI (1), 2024)

Comparison of Machine Learning-Enhanced Dynamic Hybrid Models for a Nanobody Scorpion Antivenom Production with Escherichia Coli. - Irene Martínez-Menéndez; Juan C. Acosta-Pavas; David Camilo Corrales; Susana María Alonso Villela; Balkiss Bouhaouala-Zahar; Georgios K. Georgakilas; Konstantinos Mexis; Stefanos Xenios; Theodore Dalamagas 001; Antonis Kokosis; Michael O'donohue; Luc Fillaudeau; et al. (DCAI (1), 2024)

Towards a machine learning operations (MLOps) soft sensor for real-time predictions in industrial-scale fed-batch fermentation. - Brett Metcalfe; Juan C. Acosta-Pavas; Carlos Eduardo Robles-Rodríguez; Georgios K. Georgakilas; Theodore Dalamagas 001; Cesar Arturo Aceves-Lara; Fayza Daboussi; Jasper J. Koehorst; David Camilo Corrales (Comput. Chem. Eng., 2025)