Towards Real Time Epidemiology: Data Assimilation, Modeling and Anomaly Detection of Health Surveillance Data Streams. - Luís M. A. Bettencourt; Ruy M. Ribeiro; Gerardo Chowell; Timothy Lant; Carlos Castillo-Chavez (BioSurveillance, 2007)

Signatures of non-homogeneous mixing in disease outbreaks. - Tom L. Burr; Gerardo Chowell (Math. Comput. Model., 2008)

Risk Factors for Mortality among 2009 A/H1N1 Influenza Hospitalizations in Maricopa County, Arizona, April 2009 to March 2010. - Gerardo Chowell; Aurimar Ayala; Vjollca Berisha; Cécile Viboud; Mare Schumacher (Comput. Math. Methods Medicine, 2012)

A Data-Driven Mathematical Model of CA-MRSA Transmission among Age Groups: Evaluating the Effect of Control Interventions. - Xiaoxia Wang; Sarada Panchanathan; Gerardo Chowell (PLoS Comput. Biol., 2013)

Impact of School Cycles and Environmental Forcing on the Timing of Pandemic Influenza Activity in Mexican States, May-December 2009. - James Tamerius; Cécile Viboud; Jeffrey Shaman; Gerardo Chowell (PLoS Comput. Biol., 2015)

Null models for community detection in spatially embedded, temporal networks. - Marta Sarzynska; Elizabeth A. Leicht; Gerardo Chowell; Mason A. Porter (J. Complex Networks, 2016)

Using Simple Dynamic Analytic Framework To Characterize And Forecast Epidemics. - Amna Tariq; Kimberlyn Roosa; Gerardo Chowell (WSC, 2020)

A large-scale COVID-19 Twitter chatter dataset for open scientific research - an international collaboration. - Juan M. Banda; Ramya Tekumalla; Guanyu Wang; Jingyuan Yu; Tuo Liu; Yuning Ding; Gerardo Chowell (CoRR, 2020)

An ensemble n-sub-epidemic modeling framework for short-term forecasting epidemic trajectories: Application to the COVID-19 pandemic in the USA. - Gerardo Chowell; Sushma Dahal; Amna Tariq; Kimberlyn Roosa; James Mac Hyman; Ruiyan Luo (PLoS Comput. Biol., 2022)

Community Structure and Temporal Dynamics of Viral Epistatic Networks Allow for Early Detection of Emerging Variants with Altered Phenotypes. - Fatemeh Mohebbi; Alexander Zelikovsky; Serghei Mangul; Gerardo Chowell; Pavel Skums (RECOMB, 2024)

Assembling ensembling: An adventure in approaches across disciplines. - Amanda Bleichrodt; Lydia Bourouiba; Gerardo Chowell; Eric T. Lofgren; J. Michael Reed; Sadie J. Ryan; Nina H. Fefferman (CoRR, 2024)