A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes. - Gert Thijs; Kathleen Marchal; Magali Lescot; Stephane Rombauts; Bart De Moor; Pierre Rouzé; Yves Moreau (RECOMB, 2001)

A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling. - Gert Thijs; Magali Lescot; Kathleen Marchal; Stephane Rombauts; Bart De Moor; Pierre Rouzé; Yves Moreau (Bioinform., 2001)

Adaptive quality-based clustering of gene expression profiles. - Frank De Smet; Janick Mathys; Kathleen Marchal; Gert Thijs; Bart De Moor; Yves Moreau (Bioinform., 2002)

INCLUSive: INtegrated Clustering, Upstream sequence retrieval and motif Sampling. - Gert Thijs; Yves Moreau; Frank De Smet; Janick Mathys; Magali Lescot; Stephane Rombauts; Pierre Rouzé; Bart De Moor; Kathleen Marchal (Bioinform., 2002)

A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes. - Gert Thijs; Kathleen Marchal; Magali Lescot; Stephane Rombauts; Bart De Moor; Pierre Rouzé; Yves Moreau (J. Comput. Biol., 2002)

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. - Magali Lescot; Patrice Déhais; Gert Thijs; Kathleen Marchal; Yves Moreau; Yves Van de Peer; Pierre Rouzé; Stephane Rombauts (Nucleic Acids Res., 2002)

Functional bioinformatics of microarray data: from expression to regulation. - Yves Moreau; Frank De Smet; Gert Thijs; Kathleen Marchal; Bart De Moor (Proc. IEEE, 2002)

Computational detection of cis-regulatory modules. - Stein Aerts; Peter Van Loo; Gert Thijs; Yves Moreau; Bart De Moor (ECCB, 2003)

INCLUSive: a web portal and service registry for microarray and regulatory sequence analysis. - Bert Coessens; Gert Thijs; Stein Aerts; Kathleen Marchal; Frank De Smet; Kristof Engelen; Patrick Glenisson; Yves Moreau; Janick Mathys; Bart De Moor (Nucleic Acids Res., 2003)

TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis. - Stein Aerts; Peter Van Loo; Gert Thijs; Herbert Mayer; Rainer de Martin; Yves Moreau; Bart De Moor (Nucleic Acids Res., 2005)

More robust detection of motifs in coexpressed genes by using phylogenetic information. - Pieter Monsieurs; Gert Thijs; Abeer A. Fadda; Sigrid C. J. De Keersmaecker; Jozef Vanderleyden; Bart De Moor; Kathleen Marchal (BMC Bioinform., 2006)

Application of spectrophores™ to map vendor chemical space using self-organising maps. - Gert Thijs; Wilfried Langenaeker; Hans De Winter (J. Cheminformatics, 2011)

Spectrophores as one-dimensional descriptors calculated from three-dimensional atomic properties: applications ranging from scaffold hopping to multi-target virtual screening. - Rafaela Gladysz; Fábio Mendes dos Santos; Wilfried Langenaeker; Gert Thijs; Koen Augustyns; Hans De Winter (J. Cheminformatics, 2018)