A Fine-Grained Parallel Intra Prediction for HEVC Based on GPU. - Wenbin Jiang 001; Ye Chi; Hai Jin 001; Xiaofei Liao; Yangsong Zhang; Geyan Ye (ICPADS, 2016)

FiLayer: A Novel Fine-Grained Layer-Wise Parallelism Strategy for Deep Neural Networks. - Wenbin Jiang 001; Yangsong Zhang; Pai Liu; Geyan Ye; Hai Jin 001 (ICANN (3), 2018)

A Novel Stochastic Gradient Descent Algorithm Based on Grouping over Heterogeneous Cluster Systems for Distributed Deep Learning. - Wenbin Jiang 001; Geyan Ye; Laurence T. Yang; Jian Zhu; Yang Ma; Xia Xie; Hai Jin 001 (CCGRID, 2019)

Dual Message Passing Neural Network for Molecular Property Prediction. - Hehuan Ma; Yatao Bian; Yu Rong 001; Wenbing Huang 001; Tingyang Xu; Weiyang Xie; Geyan Ye; Junzhou Huang (CoRR, 2020)

Exploiting potential of deep neural networks by layer-wise fine-grained parallelism. - Wenbin Jiang 001; Yangsong Zhang; Pai Liu; Jing Peng; Laurence T. Yang; Geyan Ye; Hai Jin 001 (Future Gener. Comput. Syst., 2020)

Cross-dependent graph neural networks for molecular property prediction. - Hehuan Ma; Yatao Bian; Yu Rong 001; Wenbing Huang 001; Tingyang Xu; Weiyang Xie; Geyan Ye; Junzhou Huang (Bioinform., 2022)

DrugAssist: a large language model for molecule optimization. - Geyan Ye; Xibao Cai; Houtim Lai; Xing Wang 007; Junhong Huang; Longyue Wang; Wei Liu 005; Xiangxiang Zeng (Briefings Bioinform., 2024)

Functional Protein Design with Local Domain Alignment. - Chaohao Yuan; Songyou Li; Geyan Ye; Yikun Zhang; Long-Kai Huang; Wenbing Huang 001; Wei Liu 005; Jianhua Yao 001; Yu Rong 001 (CoRR, 2024)

Atomas: Hierarchical Alignment on Molecule-Text for Unified Molecule Understanding and Generation. - Yikun Zhang; Geyan Ye; Chaohao Yuan; Bo Han 003; Long-Kai Huang; Jianhua Yao 001; Wei Liu 005; Yu Rong 001 (CoRR, 2024)

Atomas: Hierarchical Adaptive Alignment on Molecule-Text for Unified Molecule Understanding and Generation. - Yikun Zhang; Geyan Ye; Chaohao Yuan; Bo Han 003; Long-Kai Huang; Jianhua Yao 001; Wei Liu 005; Yu Rong 001 (ICLR, 2025)

Annotation-guided Protein Design with Multi-Level Domain Alignment. - Chaohao Yuan; Songyou Li; Geyan Ye; Yikun Zhang; Long-Kai Huang; Wenbing Huang 001; Wei Liu 005; Jianhua Yao 001; Yu Rong 001 (KDD (1), 2025)