Axiope - Data sharing using distributed catalogs. - Giampaolo D'Alessandro (Neuroinformatics, 2003)

A cross-platform freeware tool for digital reconstruction of neuronal arborizations from image stacks. - Kerry M. Brown; Duncan E. Donohue; Giampaolo D'Alessandro; Giorgio A. Ascoli (Neuroinformatics, 2005)

The Ion Channel Inverse Problem: Neuroinformatics Meets Biophysics. - Robert C. Cannon; Giampaolo D'Alessandro (PLoS Comput. Biol., 2006)

An Efficient Q-Tensor-Based Algorithm for Liquid Crystal Alignment away from Defects. - Keith R. Daly; Giampaolo D'Alessandro; Malgosia Kaczmarek (SIAM J. Appl. Math., 2010)

Multiscale Models of Metallic Particles in Nematic Liquid Crystals. - Thomas P. Bennett; Giampaolo D'Alessandro; Keith R. Daly (SIAM J. Appl. Math., 2018)

Multiscale geometrical and topological learning in the analysis of soft matter collective dynamics. - Tetiana Orlova; Amaranta Membrillo Solis; Hayley R. O. Sohn; Tristan Madeleine; Giampaolo D'Alessandro; Ivan I. Smalyukh; Malgosia Kaczmarek; Jacek Brodzki (CoRR, 2025)