Competition between protein aggregation and protein complex formation. - Sebastian Pechmann; Emmanuel D. Levy; Gian Gaetano Tartaglia; Michele Vendruscolo (BMC Bioinform., 2008)

catRAPID omics: a web server for large-scale prediction of protein-RNA interactions. - Federico Agostini; Andreas Zanzoni; Petr Klus; Domenica Marchese; Davide Cirillo; Gian Gaetano Tartaglia (Bioinform., 2013)

ccSOL omics: a webserver for solubility prediction of endogenous and heterologous expression in Escherichia coli. - Federico Agostini; Davide Cirillo; Carmen Maria Livi; Riccardo Delli Ponti; Gian Gaetano Tartaglia (Bioinform., 2014)

The cleverSuite approach for protein characterization: predictions of structural properties, solubility, chaperone requirements and RNA-binding abilities. - Petr Klus; Benedetta Bolognesi; Federico Agostini; Domenica Marchese; Andreas Zanzoni; Gian Gaetano Tartaglia (Bioinform., 2014)

ALMOST: An all atom molecular simulation toolkit for protein structure determination. - Biao Fu; Aleksandr B. Sahakyan; Carlo Camilloni; Gian Gaetano Tartaglia; Emanuele Paci; Amedeo Caflisch; Michele Vendruscolo; Andrea Cavalli (J. Comput. Chem., 2014)

catRAPID signature: identification of ribonucleoproteins and RNA-binding regions. - Carmen Maria Livi; Petr Klus; Riccardo Delli Ponti; Gian Gaetano Tartaglia (Bioinform., 2016)

omiXcore: a web server for prediction of protein interactions with large RNA. - Alexandros Armaos; Davide Cirillo; Gian Gaetano Tartaglia (Bioinform., 2017)

iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine. - Anastasia Krithara; Fotis Aisopos; Vassiliki Rentoumi; Anastasios Nentidis; Konstantinos Bougiatiotis; Maria-Esther Vidal; Ernestina Menasalvas; Alejandro Rodríguez González; Eleftherios Samaras; Peter Garrard; Maria Torrente; Mariano Provencio Pulla; et al. (CBMS, 2019)

Insights on protein thermal stability: a graph representation of molecular interactions. - Mattia Miotto; Pier Paolo Olimpieri; Lorenzo Di Rienzo; Francesco Ambrosetti; Pietro Corsi; Rosalba Lepore; Gian Gaetano Tartaglia; Edoardo Milanetti (Bioinform., 2019)

RNAct: Protein-RNA interaction predictions for model organisms with supporting experimental data. - Benjamin Lang 001; Alexandros Armaos; Gian Gaetano Tartaglia (Nucleic Acids Res., 2019)

Interactive Extreme: Scale Analytics Towards Battling Cancer. - Nikos Giatrakos; Nikos Katzouris; Antonios Deligiannakis; Alexander Artikis; Minos N. Garofalakis; George Paliouras; Holger Arndt 003; Raffaele Grasso; Ralf Klinkenberg; Miguel Ponce de Leon; Gian Gaetano Tartaglia; Alfonso Valencia; et al. (IEEE Technol. Soc. Mag., 2019)

CROSSalive: a web server for predicting the in vivo structure of RNA molecules. - Riccardo Delli Ponti; Alexandros Armaos; Andrea Vandelli; Gian Gaetano Tartaglia (Bioinform., 2020)

BacFITBase: a database to assess the relevance of bacterial genes during host infection. - Javier Macho Rendón; Benjamin Lang 001; Gian Gaetano Tartaglia; Marc Torrent Burgas (Nucleic Acids Res., 2020)

Prediction of gene expression time series and structural analysis of gene regulatory networks using recurrent neural networks. - Michele Monti; Jonathan Fiorentino; Edoardo Milanetti; Giorgio Gosti; Gian Gaetano Tartaglia (CoRR, 2021)

catRAPID omics v2.0: going deeper and wider in the prediction of protein-RNA interactions. - Alexandros Armaos; Alessio Colantoni; Gabriele Proietti; Jakob Rupert; Gian Gaetano Tartaglia (Nucleic Acids Res., 2021)

DualSeqDB: the host-pathogen dual RNA sequencing database for infection processes. - Javier Macho Rendón; Benjamin Lang 001; Marc Ramos llorens; Gian Gaetano Tartaglia; Marc Torrent Burgas (Nucleic Acids Res., 2021)

Thermometer: a webserver to predict protein thermal stability. - Mattia Miotto; Alexandros Armaos; Lorenzo Di Rienzo; Giancarlo Ruocco; Edoardo Milanetti; Gian Gaetano Tartaglia (Bioinform., 2022)

Prediction of Time Series Gene Expression and Structural Analysis of Gene Regulatory Networks Using Recurrent Neural Networks. - Michele Monti; Jonathan Fiorentino; Edoardo Milanetti; Giorgio Gosti; Gian Gaetano Tartaglia (Entropy, 2022)

The PRALINE database: protein and Rna humAn singLe nucleotIde variaNts in condEnsates. - Andrea Vandelli; Magdalena Arnal Segura; Michele Monti; Jonathan Fiorentino; Laura Broglia; Alessio Colantoni; Natalia Sanchez de Groot; Marc Torrent Burgas; Alexandros Armaos; Gian Gaetano Tartaglia (Bioinform., 2023)