Rediscovering secondary structures as network motifs - an unsupervised learning approach. - Barak Raveh; Ofer Rahat; Ronen Basri; Gideon Schreiber (Bioinform., 2007)

ProMateus - an open research approach to protein-binding sites analysis. - Hani Neuvirth; Uri Heinemann; David Birnbaum; Naftali Tishby; Gideon Schreiber (Nucleic Acids Res., 2007)

Understanding hydrogen-bond patterns in proteins using network motifs. - Ofer Rahat; Uri Alon 001; Yaakov Levy; Gideon Schreiber (Bioinform., 2009)

Four Distances between Pairs of Amino Acids Provide a Precise Description of their Interaction. - Mati Cohen; Vladimir Potapov; Gideon Schreiber (PLoS Comput. Biol., 2009)

Protein structure modelling and evaluation based on a 4-distance description of side-chain interactions. - Vladimir Potapov; Mati Cohen; Yuval Inbar; Gideon Schreiber (BMC Bioinform., 2010)

PyInteraph: A Framework for the Analysis of Interaction Networks in Structural Ensembles of Proteins. - Matteo Tiberti; Gaetano Invernizzi; Matteo Lambrughi; Yuval Inbar; Gideon Schreiber; Elena Papaleo (J. Chem. Inf. Model., 2014)