Angel: Towards a Multi-level Method for the Analysis of Variants in Individual Genomes. - Ginés Almagro-Hernández; Francisco García-Sánchez 001; María Eugenia de la Morena-Barrio; Javier Corral; Jesualdo Tomás Fernández-Breis (IWBBIO, 2016)

Discovering the Most Characteristic Motif from a Set of Peak Sequences. - Ginés Almagro-Hernández; Jesualdo Tomás Fernández-Breis (IWBBIO, 2020)

OntoGenix: Leveraging Large Language Models for enhanced ontology engineering from datasets. - Mikel Val-Calvo; Mikel Egaña Aranguren; Juan M. Martínez-Hernández; Ginés Almagro-Hernández; Prashant Deshmukh; José Antonio Bernabé-Díaz; Paola Espinoza-Arias; José Luis Sánchez-Fernández; Juergen Mueller; Jesualdo Tomás Fernández-Breis (Inf. Process. Manag., 2025)

Evaluation of alignment methods to support the assessment of similarity between e-commerce knowledge graphs. - Ginés Almagro-Hernández; Juan M. Martínez-Hernández; Prashant Deshmukh; José Antonio Bernabé-Díaz; José Luis Sánchez-Fernández; Paola Espinoza-Arias; Juergen Mueller; Jesualdo Tomás Fernández-Breis (Knowl. Based Syst., 2025)