An Extension of the Burrows Wheeler Transform and Applications to Sequence Comparison and Data Compression. - Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (CPM, 2005)

An extension of the Burrows-Wheeler Transform. - Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (Theor. Comput. Sci., 2007)

A New Combinatorial Approach to Sequence Comparison. - Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (Theory Comput. Syst., 2008)

Balanced Words Having Simple Burrows-Wheeler Transform. - Antonio Restivo; Giovanna Rosone (Developments in Language Theory, 2009)

On Balancing of a Direct Product. - Antonio Restivo; Giovanna Rosone (ICTCS, 2009)

Burrows-Wheeler transform and palindromic richness. - Antonio Restivo; Giovanna Rosone (Theor. Comput. Sci., 2009)

Lightweight BWT Construction for Very Large String Collections. - Markus J. Bauer; Anthony J. Cox; Giovanna Rosone (CPM, 2011)

Balancing and clustering of words in the Burrows-Wheeler transform. - Antonio Restivo; Giovanna Rosone (Theor. Comput. Sci., 2011)

Lightweight LCP Construction for Next-Generation Sequencing Datasets. - Markus J. Bauer; Anthony J. Cox; Giovanna Rosone; Marinella Sciortino (WABI, 2012)

Comparing DNA Sequence Collections by Direct Comparison of Compressed Text Indexes. - Anthony J. Cox; Tobias Jakobi; Giovanna Rosone; Ole Schulz-Trieglaff (WABI, 2012)

Large-scale compression of genomic sequence databases with the Burrows-Wheeler transform. - Anthony J. Cox; Markus J. Bauer; Tobias Jakobi; Giovanna Rosone (Bioinform., 2012)

On the product of balanced sequences. - Antonio Restivo; Giovanna Rosone (RAIRO Theor. Informatics Appl., 2012)

The Burrows-Wheeler Transform between Data Compression and Combinatorics on Words. - Giovanna Rosone; Marinella Sciortino (CiE, 2013)

Suffixes, Conjugates and Lyndon Words. - Silvia Bonomo; Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (Developments in Language Theory, 2013)

Sorting Suffixes of a Text via its Lyndon Factorization. - Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (Stringology, 2013)

Lightweight algorithms for constructing and inverting the BWT of string collections. - Markus J. Bauer; Anthony J. Cox; Giovanna Rosone (Theor. Comput. Sci., 2013)

Adaptive reference-free compression of sequence quality scores. - Lilian Janin; Giovanna Rosone; Anthony J. Cox (Bioinform., 2014)

Sorting conjugates and Suffixes of Words in a Multiset. - Silvia Bonomo; Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (Int. J. Found. Comput. Sci., 2014)

Suffix array and Lyndon factorization of a text. - Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (J. Discrete Algorithms, 2014)

Lightweight LCP construction for very large collections of strings. - Anthony J. Cox; Fabio Garofalo; Giovanna Rosone; Marinella Sciortino (J. Discrete Algorithms, 2016)

On-Line Pattern Matching on Similar Texts. - Roberto Grossi; Costas S. Iliopoulos; Chang Liu 035; Nadia Pisanti; Solon P. Pissis; Ahmad Retha; Giovanna Rosone; Fatima Vayani; Luca Versari (CPM, 2017)

Burrows-Wheeler Transform and Run-Length Enconding. - Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (WORDS, 2017)

Pattern Matching on Elastic-Degenerate Text with Errors. - Giulia Bernardini 001; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (SPIRE, 2017)

On Fixed Points of the Burrows-Wheeler Transform. - Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Floriana Russo; Marinella Sciortino (Fundam. Informaticae, 2017)

Measuring the clustering effect of BWT via RLE. - Sabrina Mantaci; Antonio Restivo; Giovanna Rosone; Marinella Sciortino; Luca Versari (Theor. Comput. Sci., 2017)

Block Sorting-Based Transformations on Words: Beyond the Magic BWT. - Raffaele Giancarlo; Giovanni Manzini; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (DLT, 2018)

Longest Property-Preserved Common Factor. - Lorraine A. K. Ayad; Giulia Bernardini 001; Roberto Grossi; Costas S. Iliopoulos; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (SPIRE, 2018)

The Colored Longest Common Prefix Array Computed via Sequential Scans. - Fabio Garofalo; Giovanna Rosone; Marinella Sciortino; Davide Verzotto (SPIRE, 2018)

Degenerate String Comparison and Applications. - Mai Alzamel; Lorraine A. K. Ayad; Giulia Bernardini 001; Roberto Grossi; Costas S. Iliopoulos; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (WABI, 2018)

Detecting Mutations by eBWT. - Nicola Prezza; Nadia Pisanti; Marinella Sciortino; Giovanna Rosone (WABI, 2018)

Lightweight Metagenomic Classification via eBWT. - Veronica Guerrini; Giovanna Rosone (AlCoB, 2019)

A New Class of Searchable and Provably Highly Compressible String Transformations. - Raffaele Giancarlo; Giovanni Manzini; Giovanna Rosone; Marinella Sciortino (CPM, 2019)

Space-Efficient Computation of the LCP Array from the Burrows-Wheeler Transform. - Nicola Prezza; Giovanna Rosone (CPM, 2019)

Even Faster Elastic-Degenerate String Matching via Fast Matrix Multiplication. - Giulia Bernardini 001; Pawel Gawrychowski; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (ICALP, 2019)

String Attractors and Combinatorics on Words. - Sabrina Mantaci; Antonio Restivo; Giuseppe Romana; Giovanna Rosone; Marinella Sciortino (ICTCS, 2019)

String Sanitization: A Combinatorial Approach. - Giulia Bernardini 001; Huiping Chen; Alessio Conte; Roberto Grossi; Grigorios Loukides; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (ECML/PKDD (1), 2019)

Online Algorithms on Antipowers and Antiperiods. - Mai Alzamel; Alessio Conte; Daniele Greco; Veronica Guerrini; Costas S. Iliopoulos; Nadia Pisanti; Nicola Prezza; Giulia Punzi; Giovanna Rosone (SPIRE, 2019)

SNPs detection by eBWT positional clustering. - Nicola Prezza; Nadia Pisanti; Marinella Sciortino; Giovanna Rosone (Algorithms Mol. Biol., 2019)

Faster Online Computation of the Succinct Longest Previous Factor Array. - Nicola Prezza; Giovanna Rosone (CiE, 2020)

gsufsort: constructing suffix arrays, LCP arrays and BWTs for string collections. - Felipe A. Louza; Guilherme P. Telles; Simon Gog; Nicola Prezza; Giovanna Rosone (Algorithms Mol. Biol., 2020)

Metagenomic analysis through the extended Burrows-Wheeler transform. - Veronica Guerrini; Felipe A. Louza; Giovanna Rosone (BMC Bioinform., 2020)

Variable-order reference-free variant discovery with the Burrows-Wheeler Transform. - Nicola Prezza; Nadia Pisanti; Marinella Sciortino; Giovanna Rosone (BMC Bioinform., 2020)

Comparing Degenerate Strings. - Mai Alzamel; Lorraine A. K. Ayad; Giulia Bernardini 001; Roberto Grossi; Costas S. Iliopoulos; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (Fundam. Informaticae, 2020)

Longest property-preserved common factor: A new string-processing framework. - Lorraine A. K. Ayad; Giulia Bernardini 001; Roberto Grossi; Costas S. Iliopoulos; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (Theor. Comput. Sci., 2020)

Approximate pattern matching on elastic-degenerate text. - Giulia Bernardini 001; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (Theor. Comput. Sci., 2020)

The Alternating BWT: An algorithmic perspective. - Raffaele Giancarlo; Giovanni Manzini; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (Theor. Comput. Sci., 2020)

A combinatorial view on string attractors. - Sabrina Mantaci; Antonio Restivo; Giuseppe Romana; Giovanna Rosone; Marinella Sciortino (Theor. Comput. Sci., 2021)

Space-efficient construction of compressed suffix trees. - Nicola Prezza; Giovanna Rosone (Theor. Comput. Sci., 2021)

Combinatorial Algorithms for String Sanitization. - Giulia Bernardini 001; Huiping Chen; Alessio Conte; Roberto Grossi; Grigorios Loukides; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone; Michelle Sweering (ACM Trans. Knowl. Discov. Data, 2021)

Lossy Compressor Preserving Variant Calling through Extended BWT. - Veronica Guerrini; Felipe A. Louza; Giovanna Rosone (BIOINFORMATICS, 2022)

Parallel Lossy Compression for Large FASTQ Files. - Veronica Guerrini; Felipe A. Louza; Giovanna Rosone (BIOSTEC (Selected Papers), 2022)

phyBWT: Alignment-Free Phylogeny via eBWT Positional Clustering. - Veronica Guerrini; Alessio Conte; Roberto Grossi; Gianni Liti; Giovanna Rosone; Lorenzo Tattini (WABI, 2022)

Elastic-Degenerate String Matching via Fast Matrix Multiplication. - Giulia Bernardini 001; Pawel Gawrychowski; Nadia Pisanti; Solon P. Pissis; Giovanna Rosone (SIAM J. Comput., 2022)

Computing the optimal BWT of very large string collections. - Davide Cenzato; Veronica Guerrini; Zsuzsanna Lipták; Giovanna Rosone (DCC, 2023)

A new class of string transformations for compressed text indexing. - Raffaele Giancarlo; Giovanni Manzini; Antonio Restivo; Giovanna Rosone; Marinella Sciortino (Inf. Comput., 2023)

phyBWT2: phylogeny reconstruction via eBWT positional clustering. - Veronica Guerrini; Alessio Conte; Roberto Grossi; Gianni Liti; Giovanna Rosone; Lorenzo Tattini (Algorithms Mol. Biol., 2023)

A Class of Heuristics for Reducing the Number of BWT-Runs in the String Ordering Problem. - Gianmarco Bertola; Anthony J. Cox; Veronica Guerrini; Giovanna Rosone (CPM, 2024)

The Burrows-Wheeler Transform of an Elastic-Degenerate String. - Lapo Cioni; Veronica Guerrini; Giovanna Rosone (ICTCS, 2024)

Novel XBWT-based Distance Measures for Labeled Trees. - Danilo G. Dolce; Sabrina Mantaci; Giuseppe Romana; Giovanna Rosone; Marinella Sciortino (ICTCS, 2024)

Subsequence-Based Indices for Genome Sequence Analysis. - Giovanni Buzzega; Alessio Conte; Veronica Guerrini; Giulia Punzi; Giovanna Rosone; Lorenzo Tattini (From Strings to Graphs, and Back Again, 2025)

BWT for String Collections. - Davide Cenzato; Zsuzsanna Lipták; Nadia Pisanti; Giovanna Rosone; Marinella Sciortino (The Expanding World of Compressed Data, 2025)

Algorithms for Computing Very Large BWTs: a Short Survey. - Diego Díaz-Domínguez; Lavinia Egidi; Veronica Guerrini; Felipe A. Louza; Giovanna Rosone (The Expanding World of Compressed Data, 2025)

Wavelet Tree, Part II: Text Indexing. - Paolo Ferragina; Raffaele Giancarlo; Roberto Grossi; Giovanna Rosone; Rossano Venturini; Jeffrey Scott Vitter (The Expanding World of Compressed Data, 2025)

Wavelet Tree, Part I: A Brief History. - Paolo Ferragina; Raffaele Giancarlo; Giovanni Manzini; Giovanna Rosone; Rossano Venturini; Jeffrey Scott Vitter (From Strings to Graphs, and Back Again, 2025)

BWT and Combinatorics on Words. - Gabriele Fici; Sabrina Mantaci; Antonio Restivo; Giuseppe Romana; Giovanna Rosone; Marinella Sciortino (The Expanding World of Compressed Data, 2025)