TargetFinder: searching annotated sequence databases for target genes of transcription factors. - Giovanni Lavorgna; Alessandro Guffanti; G. Borsani; Andrea Ballabio; E. Boncinelli (Bioinform., 1999)

AntiHunter: searching BLAST output for EST antisense transcripts. - Giovanni Lavorgna; Luca Sessa; Alessandro Guffanti; Lelio Lassandro; Giorgio Casari (Bioinform., 2004)

Statistical Methods for the Discovery of Co-Operative Transcription Factors: The Co-bind Code Revised. - Giovanni Lavorgna; Paolo Palazzari; Alessandro Marongiu; Vittorio Rosato; Simone Melchionna; Paolo Verrecchia (IPDPS, 2005)

AntiHunter 2.0: increased speed and sensitivity in searching BLAST output for EST antisense transcripts. - Giovanni Lavorgna; Riccardo Triunfo; Federico Andrea Santoni; Ugo Orfanelli; Sara Noci; Alessandro Bulfone; Gianluigi Zanetti; Giorgio Casari (Nucleic Acids Res., 2005)