Application of RotaSVM for HLA Class II Protein-Peptide Interaction Prediction. - Shib Sankar Bhowmick; Indrajit Saha; Giovanni Mazzocco; Ujjwal Maulik; Luís Rato; Debotosh Bhattacharjee; Dariusz Plewczynski (BIOINFORMATICS, 2014)

MaER: A New Ensemble Based Multiclass Classifier for Binding Activity Prediction of HLA Class II Proteins. - Giovanni Mazzocco; Shib Sankar Bhowmick; Indrajit Saha; Ujjwal Maulik; Debotosh Bhattacharjee; Dariusz Plewczynski (PReMI, 2015)

3DFlu: database of sequence and structural variability of the influenza hemagglutinin at population scale. - Giovanni Mazzocco; Michal Lazniewski; Piotr Migdal; Teresa Szczepinska; Jan P. Radomski; Dariusz Plewczynski (Database J. Biol. Databases Curation, 2016)

3D-GNOME: an integrated web service for structural modeling of the 3D genome. - Przemyslaw Szalaj; Paul J. Michalski; Przemyslaw Wróblewski; Zhonghui Tang; Michal Kadlof; Giovanni Mazzocco; Yijun Ruan; Dariusz Plewczynski (Nucleic Acids Res., 2016)

Divide and Conquer Ensemble Method for Time Series Forecasting. - Jan Kostrzewa; Giovanni Mazzocco; Dariusz Plewczynski (Trans. Comput. Collect. Intell., 2016)

BERTrand - peptide:TCR binding prediction using Bidirectional Encoder Representations from Transformers augmented with random TCR pairing. - Alexander Myronov; Giovanni Mazzocco; Paulina Król; Dariusz Plewczynski (Bioinform., 2023)