Simulating gene-gene and gene-environment interactions in complex diseases: Gene-Environment iNteraction Simulator 2. - Michele Pinelli; Giovanni Scala; Roberto Amato; Sergio Cocozza; Gennaro Miele (BMC Bioinform., 2012)

ampliMethProfiler: a pipeline for the analysis of CpG methylation profiles of targeted deep bisulfite sequenced amplicons. - Giovanni Scala; Ornella Affinito; Domenico A. Palumbo; Ermanno Florio; Antonella Monticelli; Gennaro Miele; Lorenzo Chiariotti; Sergio Cocozza (BMC Bioinform., 2016)

INfORM: Inference of NetwOrk Response Modules. - Veer Singh Marwah; Pia Anneli Sofia Kinaret; Angela Serra; Giovanni Scala; Antti Lauerma; Vittorio Fortino; Dario Greco (Bioinform., 2018)

FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments. - Giovanni Scala; Angela Serra; Veer Singh Marwah; Laura Aliisa Saarimäki; Dario Greco (BMC Bioinform., 2019)

eUTOPIA: solUTion for Omics data PreprocessIng and Analysis. - Veer Singh Marwah; Giovanni Scala; Pia Anneli Sofia Kinaret; Angela Serra; Harri Alenius; Vittorio Fortino; Dario Greco (Source Code Biol. Medicine, 2019)

Feature set optimization in biomarker discovery from genome-scale data. - Vittorio Fortino; Giovanni Scala; Dario Greco (Bioinform., 2020)

A review of COVID-19 biomarkers and drug targets: resources and tools. - Francesca P. Caruso; Giovanni Scala; Luigi Cerulo; Michele Ceccarelli (Briefings Bioinform., 2021)

CpGmotifs: a tool to discover DNA motifs associated to CpG methylation events. - Giovanni Scala; Antonio Federico; Dario Greco (BMC Bioinform., 2021)

Detection Power of Separability Criteria Based on a Correlation Tensor: A Case Study. - Gniewomir Sarbicki; Giovanni Scala; Dariusz Chruscinski (Open Syst. Inf. Dyn., 2021)

On the Fidelity Robustness of CHSH-Bell Inequality via Filtered Random States. - Antonio Mandarino; Giovanni Scala (Entropy, 2023)