modlAMP: Python for antimicrobial peptides. - Alex T. Müller; Gisela Gabernet; Jan A. Hiss; Gisbert Schneider (Bioinform., 2017)

A data management infrastructure for the integration of imaging and omics data in life sciences. - Luis Kuhn Cuellar; Andreas Friedrich; Gisela Gabernet; Luis de la Garza; Sven Fillinger; Adrian Seyboldt; Tobias Koch; Sven zur Oven-Krockhaus; Friederike Wanke; Sandra Richter; Wolfgang Maximilian Thaiss; Marius Horger; et al. (BMC Bioinform., 2022)

mlf-core: a framework for deterministic machine learning. - Lukas Heumos; Philipp Ehmele; Luis Kuhn Cuellar; Kevin Menden; Edmund Miller; Steffen Lemke 003; Gisela Gabernet; Sven Nahnsen (Bioinform., 2023)

nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework. - Gisela Gabernet; Susanna Marquez; Robert Bjornson; Alexander Peltzer; Hailong Meng; Edel Aron; Noah Y. Lee; Cole G. Jensen; David Ladd; Mark Polster; Friederike Hanssen; Simon Heumos; et al. (PLoS Comput. Biol., 2024)