A Membrane System for the Leukocyte Selective Recruitment. - Giuditta Franco; Vincenzo Manca (Workshop on Membrane Computing, 2003)

DNA Extraction by XPCR. - Giuditta Franco; Cinzia Giagulli; Carlo Laudanna; Vincenzo Manca (DNA, 2004)

Finding the Maximum Element Using P Systems. - Federico Fontana; Giuditta Franco (J. Univers. Comput. Sci., 2004)

DNA Recombination by XPCR. - Giuditta Franco; Vincenzo Manca; Cinzia Giagulli; Carlo Laudanna (DNA, 2005)

A Polymerase Based Algorithm for SAT. - Giuditta Franco (ICTCS, 2005)

An algorithmic analysis of DNA structure. - Giuditta Franco; Vincenzo Manca (Soft Comput., 2005)

A Relational View of Recurrence and Attractors in State Transition Dynamics. - Giuseppe Scollo; Giuditta Franco; Vincenzo Manca (RelMiCS, 2006)

Mitotic Oscillators as MP Graphs. - Giuditta Franco; Pietro Hiram Guzzi; Vincenzo Manca; Tommaso Mazza (Workshop on Membrane Computing, 2006)

P Systems for Biological Dynamics. - Luca Bianco; Federico Fontana; Giuditta Franco; Vincenzo Manca (Applications of Membrane Computing, 2006)

Forbidding - Enforcing Conditions in DNA Self-assembly of Graphs. - Giuditta Franco; Natasa Jonoska (Nanotechnology: Science and Computation, 2006)

Computing by Floating Strings. - Giuditta Franco; Maurice Margenstern (MeCBIC@ICALP, 2006)

Biomolecular computing-combinatorial algorithms and laboratory experiments. - Giuditta Franco (2006)

Toward a Representation of Hybrid Functional Petri Nets by MP Systems. - Alberto Castellini; Giuditta Franco; Vincenzo Manca (IWNC, 2007)

Knee joint injury and repair modeled by membrane systems. - Giuditta Franco; Natasa Jonoska; Barbara Osborn; Anna Plaas (Biosyst., 2008)

Relational state transition dynamics. - Giuseppe Scollo; Giuditta Franco; Vincenzo Manca (J. Log. Algebraic Methods Program., 2008)

A DNA computing inspired computational model. - Giuditta Franco; Maurice Margenstern (Theor. Comput. Sci., 2008)

Regulation and Covering Problems in MP Systems. - Giuditta Franco; Vincenzo Manca; Roberto Pagliarini (Workshop on Membrane Computing, 2009)

An Algorithm for Initial Fluxes of Metabolic P Systems. - Roberto Pagliarini; Giuditta Franco; Vincenzo Manca (Int. J. Comput. Commun. Control, 2009)

Hybrid Functional Petri Nets as MP systems. - Alberto Castellini; Giuditta Franco; Vincenzo Manca (Nat. Comput., 2010)

On Synthesizing Replicating Metabolic Systems. - Giuditta Franco; Vincenzo Manca (ERCIM News, 2011)

Foreword. - Roberto Barbuti; Giuditta Franco; Gheorghe Paun (Nat. Comput., 2011)

On aggregation in multiset-based self-assembly of graphs. - Francesco Bernardini; Robert Brijder; Matteo Cavaliere; Giuditta Franco; Hendrik Jan Hoogeboom; Grzegorz Rozenberg (Nat. Comput., 2011)

Data analysis pipeline from laboratory to MP models. - Alberto Castellini; Giuditta Franco; Roberto Pagliarini (Nat. Comput., 2011)

Algorithmic applications of XPCR. - Giuditta Franco; Vincenzo Manca (Nat. Comput., 2011)

An Investigation on Genomic Repeats. - Giuditta Franco; Alessio Milanese (CiE, 2013)

A Binary Factor Graph Model for Biclustering. - Matteo Denitto; Alessandro Farinelli; Giuditta Franco; Manuele Bicego (S+SSPR, 2014)

Towards an MP Model for B Lymphocytes Maturation. - Alberto Castellini; Giuditta Franco; Vincenzo Manca; Riccardo Ortolani; Antonio Vella (UCNC, 2014)

Perspectives in Computational Genome Analysis. - Giuditta Franco (Discrete and Topological Models in Molecular Biology, 2014)

A genome analysis based on repeat sharing gene networks. - Alberto Castellini; Giuditta Franco; Alessio Milanese (Nat. Comput., 2015)

Algorithms and models for complex natural systems. - Carlos A. Coello Coello; Giuditta Franco; Natalio Krasnogor; Mario Pavone (Nat. Comput., 2015)

Minimal Multiset Grammars for Recurrent Dynamics. - Alessandro Farinelli; Giuditta Franco; Romeo Rizzi (Int. Conf. on Membrane Computing, 2016)

Age-related relationships among peripheral B lymphocyte subpopulations. - Alberto Castellini; Giuditta Franco; Antonio Vella (CEC, 2017)

Detection of Age-Related Changes in Networks of B Cells by Multivariate Time-Series Analysis. - Alberto Castellini; Giuditta Franco (MOD, 2017)

Bayesian Clustering of Multivariate Immunological Data. - Alberto Castellini; Giuditta Franco (LOD, 2018)

Decoding Genomic Information. - Giuditta Franco; Vincenzo Manca (Computational Matter, 2018)

A word recurrence based algorithm to extract genomic dictionaries. - Vincenzo Bonnici; Giuditta Franco; Vincenzo Manca (CoRR, 2020)

A k-mer Based Sequence Similarity for Pangenomic Analyses. - Vincenzo Bonnici; Andrea Cracco; Giuditta Franco (LOD, 2021)

Conjugate word blending: formal model and experimental implementation by XPCR. - Francesco Bellamoli; Giuditta Franco; Lila Kari; Silvia Lampis; Timothy Ng 001; Zihao Wang (Nat. Comput., 2021)

Spectral concepts in genome informational analysis. - Vincenzo Bonnici; Giuditta Franco; Vincenzo Manca (Theor. Comput. Sci., 2021)

Emergence of random selections in evolution of biological populations. - Giuditta Franco; Vincenzo Manca; Marco Andreolli; Silvia Lampis (Theor. Comput. Sci., 2021)

An Investigation to Test Spectral Segments as Bacterial Biomarkers. - Silvia Astorino; Vincenzo Bonnici; Giuditta Franco (UCNC, 2023)

PanDelos-frags: A methodology for discovering pangenomic content of incomplete microbial assemblies. - Vincenzo Bonnici; Claudia Mengoni; Manuel Mangoni; Giuditta Franco; Rosalba Giugno (J. Biomed. Informatics, 2023)

A dynamic behavior epidemiological model by membrane systems. - Davide Valcamonica; Alberto d'Onofrio; Muhammad Mazhar Fareed; Giuditta Franco; Claudio Zandron (J. Membr. Comput., 2025)