sapFinder: an R/Bioconductor package for detection of variant peptides in shotgun proteomics experiments. - Bo Wen; Shaohang Xu; Gloria M. Sheynkman; Qiang Feng; Liang Lin; Quanhui Wang; Xun Xu; Jun Wang 004; Siqi Liu (Bioinform., 2014)

A reference map of the human binary protein interactome. - Katja Luck; Dae-Kyum Kim; Luke Lambourne; Kerstin Spirohn; Bridget E. Begg; Wenting Bian; Ruth Brignall; Tiziana Cafarelli; Francisco J. Campos-Laborie; Benoît Charloteaux; Dong-Sic Choi; Atina G. Coté; et al. (Nat., 2020)

A roadmap for the functional annotation of protein families: a community perspective. - Valérie de Crécy-Lagard; Rocio Amorin de Hegedus; Cecilia N. Arighi; Jill Babor; Alex Bateman; Ian Blaby; Crysten Blaby-Haas; Alan J. Bridge; Stephen K. Burley; Stacey Cleveland; Lucy J. Colwell; Ana Conesa; et al. (Database J. Biol. Databases Curation, 2022)

AD-Syn-Net: systematic identification of Alzheimer's disease-associated mutation and co-mutation vulnerabilities via deep learning. - Xingxin Pan; Zeynep H. Coban Akdemir; Ruixuan Gao; Xiaoqian Jiang; Gloria M. Sheynkman; Erxi Wu; Jason H. Huang; Nidhi Sahni; S. Stephen Yi (Briefings Bioinform., 2023)