A Map of the Protein Space: An Automatic Hierarchical Classification of all Protein Sequences. - Golan Yona; Nathan Linial; Naftali Tishby; Michal Linial (ISMB, 1998)

Modeling protein families using probabilistic suffix trees. - Gill Bejerano; Golan Yona (RECOMB, 1999)

Methods for global organization of the protein sequence space (ארגון על של רצפי חלבונים.). - Golan Yona (1999)

Towards a Complete Map of the Protein Space Based on a Unified Sequence and Structure Analysis of All Known Proteins. - Golan Yona; Michael Levitt 001 (ISMB, 2000)

A unified sequence-structure classification of protein sequences: combining sequence and structure in a map of the protein space. - Golan Yona; Michael Levitt 001 (RECOMB, 2000)

ProtoMap: automatic classification of protein sequences and hierarchy of protein families. - Golan Yona; Nathan Linial; Michal Linial (Nucleic Acids Res., 2000)

Variations on probabilistic suffix trees: statistical modeling and prediction of protein families. - Gill Bejerano; Golan Yona (Bioinform., 2001)

A New Nonparametric Pairwise Clustering Algorithm Based on Iterative Estimation of Distance Profiles. - Shlomo Dubnov; Ran El-Yaniv; Yoram Gdalyahu; Elad Schneidman; Naftali Tishby; Golan Yona (Mach. Learn., 2002)

A multi-expert system for the automatic detection of protein domains from sequence information. - Niranjan Nagarajan; Golan Yona (RECOMB, 2003)

Using a mixture of probabilistic decision trees for direct prediction of protein function. - Umar Syed; Golan Yona (RECOMB, 2003)

Automatic prediction of protein domains from sequence information using a hybrid learning system. - Niranjan Nagarajan; Golan Yona (Bioinform., 2004)

Protein family comparison using statistical models and predicted structural information. - Richard Chung; Golan Yona (BMC Bioinform., 2004)

On Prediction Using Variable Order Markov Models. - Ron Begleiter; Ran El-Yaniv; Golan Yona (J. Artif. Intell. Res., 2004)

Distributional Scaling: An Algorithm for Structure-Preserving Embedding of Metric and Nonmetric Spaces. - Michael Quist; Golan Yona (J. Mach. Learn. Res., 2004)

The Biozon System for Complex Analysis of Heterogeneous Interrelated Biological Data and Discovery of Emergent Structures. - Aaron Birkland; Golan Yona (DILS, 2005)

The distance-profile representation and its application to detection of distantly related protein families. - Chin-Jen Ku; Golan Yona (BMC Bioinform., 2005)

Automation of gene assignments to metabolic pathways using high-throughput expression data. - Liviu Popescu; Golan Yona (BMC Bioinform., 2005)

Correcting BLAST e-Values for Low-Complexity Segments. - Itai Sharon; Aaron Birkland; Kuan Y. Chang; Ran El-Yaniv; Golan Yona (J. Comput. Biol., 2005)

The URMS-RMS Hybrid Algorithm for Fast and Sensitive Local Protein Structure Alignment. - Golan Yona; Klara Kedem (J. Comput. Biol., 2005)

Effective similarity measures for expression profiles. - Golan Yona; William Dirks; Shafquat Rahman; David M. Lin (Bioinform., 2006)

BIOZON: a system for unification, management and analysis of heterogeneous biological data. - Aaron Birkland; Golan Yona (BMC Bioinform., 2006)

Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities. - Paul Shafer; Timothy Isganitis; Golan Yona (BMC Bioinform., 2006)

BIOZON: a hub of heterogeneous biological data. - Aaron Birkland; Golan Yona (Nucleic Acids Res., 2006)

Topology Search over Biological Databases. - Lin Guo; Jayavel Shanmugasundaram; Golan Yona (ICDE, 2007)

The human genome contracts again. - Dmitri S. Pavlichin; Tsachy Weissman; Golan Yona (Bioinform., 2013)

QualComp: a new lossy compressor for quality scores based on rate distortion theory. - Idoia Ochoa; Himanshu Asnani; Dinesh Bharadia; Mainak Chowdhury; Tsachy Weissman; Golan Yona (BMC Bioinform., 2013)