Sentra, a database of signal transduction proteins. - Natalia Maltsev; Elizabeth Marland; Gong-Xin Yu; Saurabha Bhatnagar; Richard W. Lusk (Nucleic Acids Res., 2002)

An SVM-based Algorithm for Identification of Photosynthesis-specific Genome Features. - Gong-Xin Yu; George Ostrouchov; Al Geist; Nagiza F. Samatova (CSB, 2003)

Inference of Protein-Protein Interactions by Unlikely Profile Pair. - Byung-Hoon Park; George Ostrouchov; Gong-Xin Yu; Al Geist; Andrey Gorin; Nagiza F. Samatova (ICDM, 2003)

In-Silico Prediction of Surface Residue Clusters for Enzyme-Substrate Specificity. - Gong-Xin Yu; Byung-Hoon Park; Praveen Chandramohan; Al Geist; Nagiza F. Samatova (CSB, 2004)

Ruleminer: a Knowledge System for Supporting High-throughput Protein Function Annotations. - Gong-Xin Yu (J. Bioinform. Comput. Biol., 2004)