Design and Implementation of Display Specification for Multimedia Answers. - Chitta Baral; Graciela Gonzalez 001; Tran Cao Son (ICDE, 1998)

SQL+D: Extended Display Capabilities for Multimedia Database Queries. - Chitta Baral; Graciela Gonzalez 001; Amarendra Nandigam (ACM Multimedia, 1998)

Conceptual Modeling and Querying in Multimedia Databases. - Chitta Baral; Graciela Gonzalez 001; Tran Cao Son (Multim. Tools Appl., 1998)

Intervals Help to Design an Imaging System. - Graciela Gonzalez 001 (Reliab. Comput., 1998)

Specifying Generic Multimedia 3D Visualizations and Temporal Presentations from Database Queries. - Chitta Baral; Graciela Gonzalez 001 (ICMCS, Vol. 1, 1999)

Modeling Multimedia Displays Using Action Based Temporal Logic. - Graciela Gonzalez 001; Chitta Baral; Peter A. Cooper (VDB, 2002)

Genomic Information Retrieval Through Selective Extraction and Tagging by the ASU-BioAL Group. - Lian Yu; Syed Toufeeq Ahmed; Graciela Gonzalez 001; Brendan Logsdon; Mutsumi Nakamura; Shawn Nikkila; Kalpesh Shah; Luis Tari; Ryan Wendt; Amanda Zeigler; Chitta Baral (TREC, 2005)

Alan: An Action Language For Modelling Non-Markovian Domains. - Graciela Gonzalez 001; Chitta Baral; Michael Gelfond (Stud Logica, 2005)

A systematic approach to active and cooperative learning in CS1 and its effects on CS2. - Graciela Gonzalez 001 (SIGCSE, 2006)

ASU at TREC 2006 Genomics Track. - Luis Tari; Graciela Gonzalez 001; Robert Leaman; Shawn Nikkila; Ryan Wendt; Chitta Baral (TREC, 2006)

Web Service Orchestration for Bioinformatics Systems: Challenges and Current Workflow Definition Approaches. - Graciela Gonzalez 001; Janaka Balasooriya (ICWS, 2007)

Mining Gene-Disease Relationships from Biomedical Literature: Weighting Proteinprotein Interactions and Connectivity. - Graciela Gonzalez 001; Juan C. Uribe; Luis Tari; Colleen Brophy; Chitta Baral (Pacific Symposium on Biocomputing, 2007)

Passage Relevancy Through Semantic Relatedness. - Luis Tari; Phan Huy Tu; Barry Lumpkin; Robert Leaman; Graciela Gonzalez 001; Chitta Baral (TREC, 2007)

Inter-species normalization of gene mentions with GNAT. - Jörg Hakenberg; Conrad Plake; Robert Leaman; Michael Schroeder 001; Graciela Gonzalez 001 (ECCB, 2008)

BANNER: An Executable Survey of Advances in Biomedical Named Entity Recognition. - Robert Leaman; Graciela Gonzalez 001 (Pacific Symposium on Biocomputing, 2008)

Molecular event extraction from Link Grammar parse trees. - Jörg Hakenberg; Illés Solt; Domonkos Tikk; Luis Tari; Astrid Rheinländer; Quang Long Nguyen; Graciela Gonzalez 001; Ulf Leser (BioNLP@HLT-NAACL (Shared Task), 2009)

Towards Effective Sentence Simplification for Automatic Processing of Biomedical Text. - Siddhartha Jonnalagadda; Luis Tari; Jörg Hakenberg; Chitta Baral; Graciela Gonzalez 001 (HLT-NAACL (Short Papers), 2009)

Querying Parse Tree Database of Medline Text to Synthesize User-Specific Biomolecular Networks. - Luis Tari; Jörg Hakenberg; Graciela Gonzalez 001; Chitta Baral (Pacific Symposium on Biocomputing, 2009)

Towards Internet-Age Pharmacovigilance: Extracting Adverse Drug Reactions from User Posts in Health-Related Social Networks. - Robert Leaman; Laura Wojtulewicz; Ryan Sullivan; Annie Skariah; Jian Yang 026; Graciela Gonzalez 001 (BioNLP@ACL, 2010)

A Distributional Semantics Approach to Simultaneous Recognition of Multiple Classes of Named Entities. - Siddhartha Jonnalagadda; Robert Leaman; Trevor Cohen; Graciela Gonzalez 001 (CICLing, 2010)

GenerIE: Information extraction using database queries. - Luis Tari; Phan Huy Tu; Jörg Hakenberg; Yi Chen 001; Tran Cao Son; Graciela Gonzalez 001; Chitta Baral (ICDE, 2010)

Sentence Simplification Aids Protein-Protein Interaction Extraction - Siddhartha Jonnalagadda; Graciela Gonzalez 001 (CoRR, 2010)

Efficient Extraction of Protein-Protein Interactions from Full-Text Articles. - Jörg Hakenberg; Robert Leaman; Nguyen Ha Vo; Siddhartha Jonnalagadda; Ryan Sullivan; Christopher Miller; Luis Tari; Chitta Baral; Graciela Gonzalez 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

Double Layered Learning for Biological Event Extraction from Text. - Ehsan Emadzadeh; Azadeh Nikfarjam; Graciela Gonzalez-Hernandez (BioNLP@ACL (Shared Task), 2011)

Applications for a Translational Biomedical Ontology Model. - Robert Yao; Graciela Gonzalez 001 (ICBO, 2011)

Evaluating Distributional Semantic and Feature Selection for Extracting Relationships from Biological Text. - Ehsan Emadzadeh; Siddhartha Jonnalagadda; Graciela Gonzalez 001 (ICMLA (2), 2011)

The DIEGO Lab Graph Based Gene Normalization System. - Ryan Sullivan; Robert Leaman; Graciela Gonzalez 001 (ICMLA (2), 2011)

Towards Integrative Gene Prioritization in Alzheimer's Disease. - Jang Lee; Graciela Gonzalez 001 (Pacific Symposium on Biocomputing, 2011)

The GNAT library for local and remote gene mention normalization. - Jörg Hakenberg; Martin Gerner; Maximilian Haeussler; Illés Solt; Conrad Plake; Michael Schroeder 001; Graciela Gonzalez 001; Goran Nenadic; Casey M. Bergman (Bioinform., 2011)

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text. - Martin Krallinger; Miguel Vazquez; Florian Leitner; David Salgado; Andrew Chatr-aryamontri; Andrew G. Winter; Livia Perfetto; Leonardo Briganti; Luana Licata; Marta Iannuccelli; Luisa Castagnoli; Gianni Cesareni; et al. (BMC Bioinform., 2011)

BioSimplify: an open source sentence simplification engine to improve recall in automatic biomedical information extraction - Siddhartha Jonnalagadda; Graciela Gonzalez 001 (CoRR, 2011)

Biomedical Informatics in Translational Research, Hai Hu, Richard J. Mural, Michael N. Liebman (Eds.). Artech House (2008). - Graciela Gonzalez 001 (J. Biomed. Informatics, 2011)

Enhancing phylogeography by improving geographical information from GenBank. - Matthew Scotch; Indra Neil Sarkar; Changjiang Mei; Robert Leaman; Kei-Hoi Cheung; Pierina Ortiz; Ashutosh Singraur; Graciela Gonzalez 001 (J. Biomed. Informatics, 2011)

Automatic Approaches for Gene-Drug Interaction Extraction from Biomedical Text: Corpus and Comparative Evaluation. - Nate Sutton; Laura Wojtulewicz; Neel Mehta; Graciela Gonzalez 001 (BioNLP@HLT-NAACL, 2012)

Proposed Ontology for Seizure and Epilepsy. - Robert Yao; Jeffrey Buchhalter; Graciela Gonzalez 001 (ICBO, 2012)

Enhancing clinical concept extraction with distributional semantics. - Siddhartha Jonnalagadda; Trevor Cohen; Stephen T. Wu; Graciela Gonzalez 001 (J. Biomed. Informatics, 2012)

Incremental Information Extraction Using Relational Databases. - Luis Tari; Phan Huy Tu; Jörg Hakenberg; Yi Chen 001; Tran Cao Son; Graciela Gonzalez 001; Chitta Baral (IEEE Trans. Knowl. Data Eng., 2012)

Session introduction. - Graciela Gonzalez 001; Kevin Bretonnel Cohen; Casey S. Greene; Udo Hahn; Maricel G. Kann; Robert Leaman; Nigam Shah; Jieping Ye (Pacific Symposium on Biocomputing, 2013)

Towards generating a patient's timeline: Extracting temporal relationships from clinical notes. - Azadeh Nikfarjam; Ehsan Emadzadeh; Graciela Gonzalez-Hernandez (J. Biomed. Informatics, 2013)

Pharmacovigilance on Twitter? Mining Tweets for Adverse Drug Reactions. - Karen O'Connor; Azadeh Nikfarjam; Rachel E. Ginn; Pranoti Pimpalkhute; Abeed Sarker; Karen L. Smith; Graciela Gonzalez-Hernandez (AMIA, 2014)

Text Classification towards Detecting Misdiagnosis of an Epilepsy Syndrome in a Pediatric Population. - Ryan Sullivan; Robert Yao; Randa Jarar; Jeffrey Buchhalter; Graciela Gonzalez 001 (AMIA, 2014)

Natural Language Processing Methods for Enhancing Geographic Metadata for Phylogeography of Zoonotic Viruses. - Tasnia Tahsin; Robert Rivera; Rachel Beard; Rob Lauder; Davy Weissenbacher; Matthew Scotch; Garrick L. Wallstrom; Graciela Gonzalez 001 (BioNLP@ACL, 2014)

Session introduction. - Graciela Gonzalez 001; Kevin Bretonnel Cohen; Robert Leaman; Casey S. Greene; Nigam Shah; Maricel G. Kann; Jieping Ye (Pacific Symposium on Biocomputing, 2014)

Unsupervised gene function extraction using semantic vectors. - Ehsan Emadzadeh; Azadeh Nikfarjam; Rachel E. Ginn; Graciela Gonzalez-Hernandez (Database J. Biol. Databases Curation, 2014)

Overview of the gene ontology task at BioCreative IV. - Yuqing Mao; Kimberly Van Auken; Donghui Li; Cecilia N. Arighi; Peter McQuilton; G. Thomas Hayman; Susan Tweedie; Mary L. Schaeffer; Stanley J. F. Laulederkind; Shur-Jen Wang; Julien Gobeill; Patrick Ruch; et al. (Database J. Biol. Databases Curation, 2014)

Session Introduction. - Graciela Gonzalez 001; Chitta Baral; Jeff Kiefer; Suengchan Kim; Jieping Ye (Pacific Symposium on Biocomputing, 2015)

DIEGOLab: An Approach for Message-level Sentiment Classification in Twitter. - Abeed Sarker; Azadeh Nikfarjam; Davy Weissenbacher; Graciela Gonzalez-Hernandez (SemEval@NAACL-HLT, 2015)

Knowledge-driven geospatial location resolution for phylogeographic models of virus migration. - Davy Weissenbacher; Tasnia Tahsin; Rachel Beard; Mari Figaro; Robert Rivera; Matthew Scotch; Graciela Gonzalez 001 (Bioinform., 2015)

Pharmacovigilance from social media: mining adverse drug reaction mentions using sequence labeling with word embedding cluster features. - Azadeh Nikfarjam; Abeed Sarker; Karen O'Connor; Rachel E. Ginn; Graciela Gonzalez-Hernandez (J. Am. Medical Informatics Assoc., 2015)

Portable automatic text classification for adverse drug reaction detection via multi-corpus training. - Abeed Sarker; Graciela Gonzalez 001 (J. Biomed. Informatics, 2015)

Utilizing social media data for pharmacovigilance: A review. - Abeed Sarker; Rachel E. Ginn; Azadeh Nikfarjam; Karen O'Connor; Karen L. Smith; Swetha Jayaraman; Tejaswi Upadhaya; Graciela Gonzalez-Hernandez (J. Biomed. Informatics, 2015)

Data, tools and resources for mining social media drug chatter. - Abeed Sarker; Graciela Gonzalez 001 (BioTxtM@COLING 2016, 2016)

Automatic Prediction of Linguistic Decline in Writings of Subjects with Degenerative Dementia. - Davy Weissenbacher; Travis A. Johnson; Laura Wojtulewicz; Amylou Dueck; Dona Locke; Richard J. Caselli; Graciela Gonzalez 001 (HLT-NAACL, 2016)

Session Introduction. - Michael J. Paul; Abeed Sarker; John S. Brownstein; Azadeh Nikfarjam; Matthew Scotch; Karen L. Smith; Graciela Gonzalez-Hernandez (PSB, 2016)

Social Media Mining Shared Task Workshop. - Abeed Sarker; Azadeh Nikfarjam; Graciela Gonzalez-Hernandez (PSB, 2016)

Finding Potentially Unsafe Nutritional Supplements from User Reviews with Topic Modeling. - Ryan Sullivan; Abeed Sarker; Karen O'Connor; Amanda Goodin; Mark Karlsrud; Graciela Gonzalez 001 (PSB, 2016)

DiegoLab16 at SemEval-2016 Task 4: Sentiment Analysis in Twitter using Centroids, Clusters, and Sentiment Lexicons. - Abeed Sarker; Graciela Gonzalez 001 (SemEval@NAACL-HLT, 2016)

Recent Advances and Emerging Applications in Text and Data Mining for Biomedical Discovery. - Graciela Gonzalez 001; Tasnia Tahsin; Britton C. Goodale; Anna C. Greene; Casey S. Greene (Briefings Bioinform., 2016)

Mining the Web for Pharmacovigilance: the Case Study of Duloxetine and Venlafaxine. - Abbas Chokor; Abeed Sarker; Graciela Gonzalez 001 (CoRR, 2016)

A high-precision rule-based extraction system for expanding geospatial metadata in GenBank records. - Tasnia Tahsin; Davy Weissenbacher; Robert Rivera; Rachel Beard; Mari Firago; Garrick L. Wallstrom; Matthew Scotch; Graciela Gonzalez 001 (J. Am. Medical Informatics Assoc., 2016)

Analysis of the effect of sentiment analysis on extracting adverse drug reactions from tweets and forum posts. - Ioannis Korkontzelos; Azadeh Nikfarjam; Matthew Shardlow; Abeed Sarker; Sophia Ananiadou; Graciela Gonzalez-Hernandez (J. Biomed. Informatics, 2016)

Hybrid Semantic Analysis for Mapping Adverse Drug Reaction Mentions in Tweets to Medical Terminology. - Ehsan Emadzadeh; Abeed Sarker; Azadeh Nikfarjam; Graciela Gonzalez-Hernandez (AMIA, 2017)

CSaRUS-CNN at AMIA-2017 Tasks 1, 2: Under Sampled CNN for Text Classification. - Arjun Magge; Matthew Scotch; Graciela Gonzalez 001 (SMM4H@AMIA, 2017)

Overview of the Second Social Media Mining for Health (SMM4H) Shared Tasks at AMIA 2017. - Abeed Sarker; Graciela Gonzalez 001 (SMM4H@AMIA, 2017)

Detecting Personal Medication Intake in Twitter: An Annotated Corpus and Baseline Classification System. - Ari Z. Klein; Abeed Sarker; Masoud Rouhizadeh; Karen O'Connor; Graciela Gonzalez 001 (BioNLP, 2017)

HLP$@$UPenn at SemEval-2017 Task 4A: A simple, self-optimizing text classification system combining dense and sparse vectors. - Abeed Sarker; Graciela Gonzalez 001 (SemEval@ACL, 2017)

Named entity linking of geospatial and host metadata in GenBank for advancing biomedical research. - Tasnia Tahsin; Davy Weissenbacher; Demetrius Jones-Shargani; Daniel Magee; Matteo Vaiente; Graciela Gonzalez 001; Matthew Scotch (Database J. Biol. Databases Curation, 2017)

Social media mining for identification and exploration of health-related information from pregnant women. - Pramod Bharadwaj Chandrashekar; Arjun Magge; Abeed Sarker; Graciela Gonzalez 001 (CoRR, 2017)

A Rule-based Approach to Determining Pregnancy Timeframe from Contextual Social Media Postings. - Masoud Rouhizadeh; Arjun Magge; Ari Z. Klein; Abeed Sarker; Graciela Gonzalez 001 (DH, 2018)

Clinical NER and Relation Extraction using Bi-Char-LSTMs and Random Forest Classifiers. - Arjun Magge; Matthew Scotch; Graciela Gonzalez-Hernandez (Medication and Adverse Drug Event Detection, 2018)

Session Introduction. - Graciela Gonzalez-Hernandez; Abeed Sarker; Karen O'Connor; Casey S. Greene; Hongfang Liu (PSB, 2018)

Dealing with Medication Non-Adherence Expressions in Twitter. - Takeshi Onishi; Davy Weissenbacher; Ari Z. Klein; Karen O'Connor; Graciela Gonzalez-Hernandez (SMM4H@EMNLP, 2018)

Overview of the Third Social Media Mining for Health (SMM4H) Shared Tasks at EMNLP 2018. - Davy Weissenbacher; Abeed Sarker; Michael J. Paul; Graciela Gonzalez-Hernandez (SMM4H@EMNLP, 2018)

Deep neural networks and distant supervision for geographic location mention extraction. - Arjun Magge; Davy Weissenbacher; Abeed Sarker; Matthew Scotch; Graciela Gonzalez-Hernandez (Bioinform., 2018)

GeoBoost: accelerating research involving the geospatial metadata of virus GenBank records. - Tasnia Tahsin; Davy Weissenbacher; Karen O'Connor; Arjun Magge; Matthew Scotch; Graciela Gonzalez-Hernandez (Bioinform., 2018)

Automatically Detecting Self-Reported Birth Defect Outcomes on Twitter for Large-scale Epidemiological Research. - Ari Z. Klein; Abeed Sarker; Davy Weissenbacher; Graciela Gonzalez-Hernandez (CoRR, 2018)

Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task. - Abeed Sarker; Maksim Belousov; Jasper Friedrichs; Kai Hakala; Svetlana Kiritchenko; Farrokh Mehryary; Sifei Han; Tung Tran 001; Anthony Rios; Ramakanth Kavuluru; Berry de Bruijn; Filip Ginter; et al. (J. Am. Medical Informatics Assoc., 2018)

Social media mining for birth defects research: A rule-based, bootstrapping approach to collecting data for rare health-related events on Twitter. - Ari Z. Klein; Abeed Sarker; Haitao Cai; Davy Weissenbacher; Graciela Gonzalez-Hernandez (J. Biomed. Informatics, 2018)

An unsupervised and customizable misspelling generator for mining noisy health-related text sources. - Abeed Sarker; Graciela Gonzalez-Hernandez (J. Biomed. Informatics, 2018)

Towards Automating Location-Specific Opioid Toxicosurveillance from Twitter via Data Science Methods. - Abeed Sarker; Graciela Gonzalez-Hernandez; Jeanmarie Perrone (MedInfo, 2019)

Text Mining and Machine Learning for Precision Medicine. - Graciela Gonzalez 001; Zhiyong Lu; Robert Leaman; Davy Weissenbacher; Mary Regina Boland; Yong Chen 016; Jingcheng Du; Juliane Fluck; Casey S. Greene; John H. Holmes; Aditya Kashyap; Rikke Linnemann Nielsen; et al. (PSB, 2019)

Bi-directional Recurrent Neural Network Models for Geographic Location Extraction in Biomedical Literature. - Arjun Magge; Davy Weissenbacher; Abeed Sarker; Matthew Scotch; Graciela Gonzalez-Hernandez (PSB, 2019)

SemEval-2019 Task 12: Toponym Resolution in Scientific Papers. - Davy Weissenbacher; Arjun Magge; Karen O'Connor; Matthew Scotch; Graciela Gonzalez-Hernandez (SemEval@NAACL-HLT, 2019)

Overview of the Fourth Social Media Mining for Health (SMM4H) Shared Tasks at ACL 2019. - Davy Weissenbacher; Abeed Sarker; Arjun Magge; Ashlynn R. Daughton; Karen O'Connor; Michael J. Paul; Graciela Gonzalez-Hernandez (SMM4H@ACL, 2019)

Disease associations depend on visit type: results from a visit-wide association study. - Mary Regina Boland; Snigdha Alur-Gupta; Lisa Levine; Peter Gabriel; Graciela Gonzalez-Hernandez (BioData Min., 2019)

Automatically Identifying Comparator Groups on Twitter for Digital Epidemiology of Pregnancy Outcomes. - Ari Z. Klein; Abeselom Gebreyesus; Graciela Gonzalez-Hernandez (CoRR, 2019)

Towards Automatic Bot Detection in Twitter for Health-related Tasks. - Anahita Davoudi; Ari Z. Klein; Abeed Sarker; Graciela Gonzalez-Hernandez (CoRR, 2019)

Comment on: "Deep learning for pharmacovigilance: recurrent neural network architectures for labeling adverse drug reactions in Twitter posts". - Arjun Magge; Abeed Sarker; Azadeh Nikfarjam; Graciela Gonzalez-Hernandez (J. Am. Medical Informatics Assoc., 2019)

Deep neural networks ensemble for detecting medication mentions in tweets. - Davy Weissenbacher; Abeed Sarker; Ari Z. Klein; Karen O'Connor; Arjun Magge; Graciela Gonzalez-Hernandez (J. Am. Medical Informatics Assoc., 2019)

An interpretable natural language processing system for written medical examination assessment. - Abeed Sarker; Ari Z. Klein; Janet Mee; Polina Harik; Graciela Gonzalez-Hernandez (J. Biomed. Informatics, 2019)

Towards scaling Twitter for digital epidemiology of birth defects. - Ari Z. Klein; Abeed Sarker; Davy Weissenbacher; Graciela Gonzalez-Hernandez (npj Digit. Medicine, 2019)

UPennHLP at WNUT-2020 Task 2 : Transformer models for classification of COVID19 posts on Twitter. - Arjun Magge; Varad Pimpalkhute; Divya Rallapalli; David Siguenza; Graciela Gonzalez-Hernandez (W-NUT@EMNLP, 2020)

Overview of the Fifth Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2020. - Ari Z. Klein; Ilseyar Alimova; Ivan Flores; Arjun Magge; Zulfat Miftahutdinov; Anne-Lyse Minard; Karen O'Connor; Abeed Sarker; Elena Tutubalina; Davy Weissenbacher; Graciela Gonzalez-Hernandez (SMM4H@COLING, 2020)

Ideas for how informaticians can get involved with COVID-19 research. - Jason H. Moore; Ian Barnett; Mary Regina Boland; Yong Chen 016; George Demiris; Graciela Gonzalez-Hernandez; Daniel S. Herman; Blanca E. Himes; Rebecca A. Hubbard; Dokyoon Kim; Jeffrey S. Morris; Danielle L. Mowery; et al. (BioData Min., 2020)

GeoBoost2: a natural languageprocessing pipeline for GenBank metadata enrichment for virus phylogeography. - Arjun Magge; Davy Weissenbacher; Karen O'Connor; Tasnia Tahsin; Graciela Gonzalez-Hernandez; Matthew Scotch (Bioinform., 2020)

Addressing Extreme Imbalance for Detecting Medications Mentioned in Twitter User Timelines. - Davy Weissenbacher; Siddharth Rawal; Arjun Magge; Graciela Gonzalez-Hernandez (AIME, 2021)

Advanced Methods for Big Data Analytics in Women's Health. - Mary Regina Boland; Karin Verspoor; Maricel G. Kann; Su Golder; Lisa Levine; Karen O'Conner; Natalia Villanueva-Rosales; Graciela Gonzalez-Hernandez (PSB, 2021)

Overview of the Sixth Social Media Mining for Health Applications (#SMM4H) Shared Tasks at NAACL 2021. - Arjun Magge; Ari Z. Klein; Antonio Miranda-Escalada; Mohammed Ali Al-Garadi; Ilseyar Alimova; Zulfat Miftahutdinov; Eulàlia Farré; Salvador Lima-López; Ivan Flores; Karen O'Connor; Davy Weissenbacher; Elena Tutubalina; et al. (SMM4H@NAACL-HLT, 2021)

ReportAGE: Automatically extracting the exact age of Twitter users based on self-reports in tweets. - Ari Z. Klein; Arjun Magge; Graciela Gonzalez-Hernandez (CoRR, 2021)

DeepADEMiner: a deep learning pharmacovigilance pipeline for extraction and normalization of adverse drug event mentions on Twitter. - Arjun Magge; Elena Tutubalina; Zulfat Miftahutdinov; Ilseyar Alimova; Anne Dirkson; Suzan Verberne; Davy Weissenbacher; Graciela Gonzalez-Hernandez (J. Am. Medical Informatics Assoc., 2021)

Active neural networks to detect mentions of changes to medication treatment in social media. - Davy Weissenbacher; Suyu Ge; Ari Z. Klein; Karen O'Connor; Robert Gross; Sean Hennessy; Graciela Gonzalez-Hernandez (J. Am. Medical Informatics Assoc., 2021)

Text classification models for the automatic detection of nonmedical prescription medication use from social media. - Mohammed Ali Al-Garadi; Yuan-Chi Yang; Haitao Cai; Yucheng Ruan; Karen O'Connor; Graciela Gonzalez-Hernandez; Jeanmarie Perrone; Abeed Sarker (BMC Medical Informatics Decis. Mak., 2021)

Overview of the Seventh Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2022. - Davy Weissenbacher; Juan M. Banda; Vera Davydova; Darryl Estrada-Zavala; Luis Gascó Sánchez; Yao Ge 003; Yuting Guo; Ari Z. Klein; Martin Krallinger; Mathias Leddin; Arjun Magge; Raul Rodriguez-Esteban; et al. (SMM4H@COLING, 2022)

Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers. - Graciela Gonzalez-Hernandez; Martin Krallinger; Monica A. Muñoz; Raul Rodriguez-Esteban; Özlem Uzuner; Lynette Hirschman (Database J. Biol. Databases Curation, 2022)

ChatGPT and large language models in academia: opportunities and challenges. - Jesse G. Meyer; Ryan J. Urbanowicz; Patrick C. N. Martin; Karen O'Connor; Ruowang Li; Pei-Chen Peng; Tiffani J. Bright; Nicholas P. Tatonetti; Kyoung-Jae Won; Graciela Gonzalez-Hernandez; Jason H. Moore (BioData Min., 2023)

Automatic Extraction of Medication Mentions from Tweets - Overview of the BioCreative VII Shared Task 3 Competition. - Davy Weissenbacher; Karen O'Connor; Siddharth Rawal; Yu Zhang 202; Richard Tzong-Han Tsai; Timothy Miller 002; Dongfang Xu; Carol Anderson; Bo Liu; Qing Han; Jinfeng Zhang; Igor Kulev; et al. (Database J. Biol. Databases Curation, 2023)

Automatic sentence segmentation of clinical record narratives in real-world data. - Dongfang Xu; Davy Weissenbacher; Karen O'Connor; Siddharth Rawal; Graciela Gonzalez-Hernandez (EMNLP, 2024)

Reddit-Impacts: A Named Entity Recognition Dataset for Analyzing Clinical and Social Effects of Substance Use Derived from Social Media. - Yao Ge 003; Sudeshna Das 002; Karen O'Connor; Mohammed Ali Al-Garadi; Graciela Gonzalez-Hernandez; Abeed Sarker (CoRR, 2024)

Overview of the 8th Social Media Mining for Health Applications (#SMM4H) shared tasks at the AMIA 2023 Annual Symposium. - Ari Z. Klein; Juan M. Banda; Yuting Guo; Ana Lucía Schmidt; Dongfang Xu; Ivan Flores Amaro; Raul Rodriguez-Esteban; Abeed Sarker; Graciela Gonzalez-Hernandez (J. Am. Medical Informatics Assoc., 2024)

Detecting goals of care conversations in clinical notes with active learning. - Davy Weissenbacher; Katherine R. Courtright; Siddharth Rawal; Andrew Crane-Droesch; Karen O'Connor; Nicholas Kuhl; Corinne Merlino; Anessa Foxwell; Lindsay Haines; Joseph C. Puhl; Graciela Gonzalez-Hernandez (J. Biomed. Informatics, 2024)

Probing Large Language Model Hidden States for Adverse Drug Reaction Knowledge. - Jacob S. Berkowitz; Davy Weissenbacher; Apoorva Srinivasan; Nadine A. Friedrich; Jose Miguel Acitores Cortina; Sophia Kivelson; Graciela Gonzalez-Hernandez; Nicholas P. Tatonetti (AIME (1), 2025)