Compressing LSTMs into CNNs. - Krzysztof J. Geras; Abdel-rahman Mohamed; Rich Caruana; Gregor Urban; Shengjie Wang; Özlem Aslan; Matthai Philipose; Matthew Richardson; Charles Sutton (CoRR, 2015)

Analysis of Deep Neural Networks with Extended Data Jacobian Matrix. - Shengjie Wang; Abdel-rahman Mohamed; Rich Caruana; Jeff A. Bilmes; Matthai Philipose; Matthew Richardson; Krzysztof J. Geras; Gregor Urban; Özlem Aslan (ICML, 2016)

Do Deep Convolutional Nets Really Need to be Deep (Or Even Convolutional)? - Gregor Urban; Krzysztof J. Geras; Samira Ebrahimi Kahou; Özlem Aslan; Shengjie Wang; Rich Caruana; Abdelrahman Mohamed; Matthai Philipose; Matthew Richardson (CoRR, 2016)

Deep MRI brain extraction: A 3D convolutional neural network for skull stripping. - Jens Kleesiek; Gregor Urban; Alexander Hubert; Daniel Schwarz; Klaus H. Maier-Hein; Martin Bendszus; Armin Biller (NeuroImage, 2016)

Do Deep Convolutional Nets Really Need to be Deep and Convolutional? - Gregor Urban; Krzysztof J. Geras; Samira Ebrahimi Kahou; Özlem Aslan; Shengjie Wang; Abdelrahman Mohamed; Matthai Philipose; Matthew Richardson; Rich Caruana (ICLR (Poster), 2017)

Inner and Outer Recursive Neural Networks for Chemoinformatics Applications. - Gregor Urban; Niranjan Subrahmanya; Pierre Baldi (J. Chem. Inf. Model., 2018)

Deep Learning for Drug Discovery and Cancer Research: Automated Analysis of Vascularization Images. - Gregor Urban; Kevin Bache; Duc T. T. Phan; Agua Sobrino; Alexander Shmakov; Stephanie J. Hachey; Christopher C. W. Hughes; Pierre Baldi (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

SSpro/ACCpro 6: almost perfect prediction of protein secondary structure and relative solvent accessibility using profiles, deep learning and structural similarity. - Gregor Urban; Christophe N. Magnan; Pierre Baldi (Bioinform., 2022)

Weakly Supervised Polyp Segmentation in Colonoscopy Images Using Deep Neural Networks. - Siwei Chen; Gregor Urban; Pierre Baldi (J. Imaging, 2022)