Feature frequency profiles for automatic sample identification using PySpark. - Gregory J. Zynda; Niall Gaffney; Mehmet M. Dalkilic; Matthew W. Vaughn (PyHPC@SC, 2015)

Repliscan: a tool for classifying replication timing regions. - Gregory J. Zynda; Jawon Song; Lorenzo Concia; Emily E. Wear; Linda Hanley-Bowdoin; William F. Thompson; Matthew W. Vaughn (BMC Bioinform., 2017)

Integrating Jupyter into Research Computing Ecosystems: Challenges and Successes in Architecting JupyterHub for Collaborative Research Computing Ecosystems. - Joe Stubbs; Julia Looney; Marjo Poindexter; Elias Chalhoub; Gregory J. Zynda; Erik S. Ferlanti; Matthew Vaughn; John M. Fonner; Maytal Dahan (PEARC, 2020)

RollingGantryCrane: Automation for unpacking containers into HPC environments. - Gregory J. Zynda; Shweta Gopaulakrishnan; John M. Fonner (CANOPIE-HPC@SC, 2021)

Characterizing Containerized HPC Applications Performance at Petascale on CPU and GPU Architectures. - Amit Ruhela; Stephen Lien Harrell; Richard Todd Evans; Gregory J. Zynda; John M. Fonner; Matt Vaughn; Tommy Minyard; John Cazes (ISC, 2021)

Early COVID-19 Pandemic Modeling: Three Compartmental Model Case Studies From Texas, USA. - Kelly A. Pierce; Ethan Ho; Xutong Wang; Remy Pasco; Zhanwei Du; Greg Zynda; Jawon Song; Gordon Wells; Spencer J. Fox; Lauren Ancel Meyers (Comput. Sci. Eng., 2021)