Medusa: Software to build and analyze ensembles of genome-scale metabolic network reconstructions. - Gregory L. Medlock; Thomas J. Moutinho Jr.; Jason A. Papin (PLoS Comput. Biol., 2020)

Comparative analyses of parasites with a comprehensive database of genome-scale metabolic models. - Maureen A. Carey; Gregory L. Medlock; Michal Stolarczyk; William A. Petri Jr.; Jennifer L. Guler; Jason A. Papin (PLoS Comput. Biol., 2022)

A computational model of Pseudomonas syringae metabolism unveils a role for branched-chain amino acids in Arabidopsis leaf colonization. - Philip J. Tubergen; Gregory L. Medlock; Anni Moore; Xiaomu Zhang; Jason A. Papin; Cristian H. Danna (PLoS Comput. Biol., 2023)