Performance Analysis of IBM Cell Broadband Engine on Sequence Alignment. - Yang Song 007; Gregory M. Striemer; Ali Akoglu (AHS, 2009)

Sequence alignment with GPU: Performance and design challenges. - Gregory M. Striemer; Ali Akoglu (IPDPS, 2009)

Scalable and highly parallel implementation of Smith-Waterman on graphics processing unit using CUDA. - Ali Akoglu; Gregory M. Striemer (Clust. Comput., 2009)

An adaptable low density parity check (LDPC) engine for space based communication systems. - Gregory M. Striemer; Ali Akoglu (AHS, 2010)

Quantitative Trait Locus Analysis Using a Partitioned Linear Model on a GPU Cluster. - Peter E. Bailey; Tapasya Patki; Gregory M. Striemer; Ali Akoglu; David K. Lowenthal; Peter Bradbury; Matt Vaughn; Liya Wang; Stephen Goff (IPDPS Workshops, 2012)

Overcoming the Limitations Posed by TCR-beta Repertoire Modeling through a GPU-Based In-Silico DNA Recombination Algorithm. - Gregory M. Striemer; Harsha Krovi; Ali Akoglu; Benjamin Vincent; Ben Hopson; Jeffrey Frelinger; Adam Buntzman (IPDPS, 2014)