Constructing Multi-Resolution Markov State Models (MSMs) to Elucidate RNA Hairpin Folding Mechanisms. - Xuhui Huang; Yuan Yao 011; Gregory R. Bowman; Jian Sun 002; Leonidas J. Guibas; Gunnar E. Carlsson; Vijay S. Pande (Pacific Symposium on Biocomputing, 2010)

Copernicus: a new paradigm for parallel adaptive molecular dynamics. - Sander Pronk; Per Larsson; Iman Pouya; Gregory R. Bowman; Imran S. Haque; Kyle Beauchamp; Berk Hess; Vijay S. Pande; Peter M. Kasson; Erik Lindahl (SC, 2011)

A Role for Both Conformational Selection and Induced Fit in Ligand Binding by the LAO Protein. - Daniel-Adriano Silva; Gregory R. Bowman; Alejandro Sosa-Peinado; Xuhui Huang (PLoS Comput. Biol., 2011)

Accurately modeling nanosecond protein dynamics requires at least microseconds of simulation. - Gregory R. Bowman (J. Comput. Chem., 2016)

Protein sequence models for prediction and comparative analysis of the SARS-CoV-2 - human interactome. - Meghana Kshirsagar 001; Nure Tasnina; Michael D. Ward; Jeffrey N. Law; T. M. Murali 001; Juan M. Lavista Ferres; Gregory R. Bowman; Judith Klein-Seetharaman (PSB, 2021)