The MidasPlus molecular modeling system. - Thomas E. Ferrin; Conrad C. Huang; Gregory S. Couch; Eric F. Pettersen; Robert Langridge (CHI, 1992)

UCSF Chimera - A visualization system for exploratory research and analysis. - Eric F. Pettersen; Thomas D. Goddard; Conrad C. Huang; Gregory S. Couch; Daniel M. Greenblatt; Elaine C. Meng; Thomas E. Ferrin (J. Comput. Chem., 2004)

Tools for integrated sequence-structure analysis with UCSF Chimera. - Elaine C. Meng; Eric F. Pettersen; Gregory S. Couch; Conrad C. Huang; Thomas E. Ferrin (BMC Bioinform., 2006)