An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network. - Brian J. Holden; John W. Pinney; Simon C. Lovell; Grigoris D. Amoutzias; David L. Robertson (BMC Bioinform., 2007)

A protein interaction atlas for the nuclear receptors: properties and quality of a hub-based dimerisation network. - Grigoris D. Amoutzias; Elgar Pichler; Nina Mian; David De Graaf; Anastasia Imsiridou; Marc Robinson-Rechavi; Erich Bornberg-Bauer; David L. Robertson; Stephen G. Oliver (BMC Syst. Biol., 2007)

Identification and analysis of mammalian KLK6 orthologue genes for prediction of physiological substrates. - Georgios Pampalakis; Maria Arampatzidou; Grigoris D. Amoutzias; Sofia Kossida; Georgia Sotiropoulou (Comput. Biol. Chem., 2008)

The Challenges of Interpreting Phosphoproteomics Data: A Critical View Through the Bioinformatics Lens. - Panayotis Vlastaridis; Stephen G. Oliver; Yves Van de Peer; Grigoris D. Amoutzias (CIBB, 2015)

T-RECs: rapid and large-scale detection of recombination events among different evolutionary lineages of viral genomes. - Michail Tsimpidis; Georgios Bachoumis; Kalliopi Mimouli; Zaharoula Kyriakopoulou; David L. Robertson; Panayotis Markoulatos; Grigoris D. Amoutzias (BMC Bioinform., 2017)

ProteoSign v2: a faster and evolved user-friendly online tool for statistical analyses of differential proteomics. - Evangelos Theodorakis; Andreas N. Antonakis; Ismini Baltsavia; Georgios A. Pavlopoulos; Martina Samiotaki; Grigoris D. Amoutzias; Theodosios Theodosiou; Oreste Acuto; Georgios Efstathiou; Ioannis Iliopoulos (Nucleic Acids Res., 2021)