Quantifying tumor heterogeneity in whole-genome and whole-exome sequencing data. - Layla Oesper; Gryte Satas; Benjamin J. Raphael (Bioinform., 2014)

Multi-state Perfect Phylogeny Mixture Deconvolution and Applications to Cancer Sequencing. - Mohammed El-Kebir; Gryte Satas; Layla Oesper; Benjamin J. Raphael (RECOMB, 2016)

Tumor phylogeny inference using tree-constrained importance sampling. - Gryte Satas; Benjamin J. Raphael (Bioinform., 2017)

Haplotype phasing in single-cell DNA-sequencing data. - Gryte Satas; Benjamin J. Raphael (Bioinform., 2018)

Inferring Tumor Evolution from Longitudinal Samples. - Matthew A. Myers; Gryte Satas; Benjamin J. Raphael (RECOMB, 2019)

Single-Cell Tumor Phylogeny Inference with Copy-Number Constrained Mutation Losses. - Gryte Satas; Simone Zaccaria; Geoffrey Mon; Benjamin J. Raphael (RECOMB, 2020)

Tumor Phylogeny Reconstruction from DNA Sequencing Data. - Gryte Satas (2020)