TandTRAQ: an open-source tool for integrated protein identification and quantitation. - Ted Laderas; Cory Bystrom; Debra McMillen; Guang Fan; Shannon K. McWeeney (Bioinform., 2007)

SEGIVE: A Practical Framework of Secure GPU Execution in Virtualization Environment. - Ziyang Wang; Fangyu Zheng; Jingqiang Lin 001; Guang Fan; Jiankuo Dong (IPCCC, 2020)

Heterogeneous-PAKE: Bridging the Gap between PAKE Protocols and Their Real-World Deployment. - Rong Wei; Fangyu Zheng; Lili Gao; Jiankuo Dong; Guang Fan; Lipeng Wan 002; Jingqiang Lin 001; Yuewu Wang (ACSAC, 2021)

TX-RSA: A High Performance RSA Implementation Scheme on NVIDIA Tegra X2. - Jiankuo Dong; Guang Fan; Fangyu Zheng; Jingqiang Lin 001; Fu Xiao 001 (WASA (2), 2021)

SECCEG: A Secure and Efficient Cryptographic Co-processor Based on Embedded GPU System. - Guang Fan; Fangyu Zheng; Jiankuo Dong; Jingqiang Lin 001; Lili Gao; Rong Wei; Lipeng Wan 002 (WASA (2), 2021)

A Novel High-performance Implementation of CRYSTALS-Kyber with AI Accelerator. - Lipeng Wan 002; Fangyu Zheng; Guang Fan; Rong Wei; Lili Gao; Jiankuo Dong; Jingqiang Lin 001; Yuewu Wang (IACR Cryptol. ePrint Arch., 2022)

TEGRAS: An Efficient Tegra Embedded GPU-Based RSA Acceleration Server. - Jiankuo Dong; Guang Fan; Fangyu Zheng; Tianyu Mao; Fu Xiao 001; Jingqiang Lin 001 (IEEE Internet Things J., 2022)

EC-ECC: Accelerating Elliptic Curve Cryptography for Edge Computing on Embedded GPU TX2. - Jiankuo Dong; Fangyu Zheng; Jingqiang Lin 001; Zhe Liu 001; Fu Xiao 001; Guang Fan (ACM Trans. Embed. Comput. Syst., 2022)

Towards Faster Fully Homomorphic Encryption Implementation with Integer and Floating-point Computing Power of GPUs. - Guang Fan; Fangyu Zheng; Lipeng Wan 002; Lili Gao; Yuan Zhao; Jiankuo Dong; Yixuan Song; Yuewu Wang; Jingqiang Lin 001 (IPDPS, 2023)

DPad-HE: Towards Hardware-friendly Homomorphic Evaluation using 4-Directional Manipulation. - Wenxu Tang; Fangyu Zheng; Guang Fan; Tian Zhou; Jingqiang Lin 001; Jiwu Jing (CCS, 2024)

ConvKyber: Unleashing the Power of AI Accelerators for Faster Kyber with Novel Iteration-based Approaches. - Tian Zhou; Fangyu Zheng; Guang Fan; Lipeng Wan 002; Wenxu Tang; Yixuan Song; Yi Bian 001; Jingqiang Lin 001 (IACR Trans. Cryptogr. Hardw. Embed. Syst., 2024)

WarpDrive: GPU-Based Fully Homomorphic Encryption Acceleration Leveraging Tensor and CUDA Cores. - Guang Fan; Mingzhe Zhang; Fangyu Zheng; Shengyu Fan; Tian Zhou; Xianglong Deng; Wenxu Tang; Liang Kong; Yixuan Song; Shoumeng Yan (HPCA, 2025)

FAST: An FHE Accelerator for Scalable-parallelism with Tunable-bit. - Shengyu Fan; Xianglong Deng; Liang Kong; Guiming Shi; Guang Fan; Dan Meng 002; Rui Hou 001; Mingzhe Zhang (ISCA, 2025)

AsyncGBP${}^{+}$+: Bridging SSL/TLS and Heterogeneous Computing Power With GPU-Based Providers. - Yi Bian 001; Fangyu Zheng; Yuewu Wang; Lingguang Lei; Yuan Ma; Tian Zhou; Jiankuo Dong; Guang Fan; Jiwu Jing (IEEE Trans. Computers, 2025)

GIF-FHE: A Comprehensive Implementation and Evaluation of GPU-Accelerated FHE With Integer and Floating-Point Computing Power. - Fangyu Zheng; Guang Fan; Wenxu Tang; Yixuan Song; Tian Zhou; Yuan Zhao; Jiankuo Dong; Jingqiang Lin 001; Shoumeng Yan; Jiwu Jing (IEEE Trans. Parallel Distributed Syst., 2025)