Increasing the efficiency of bacterial transcription simulations: When to exclude the genome without loss of accuracy. - Marco A. J. Iafolla; Guang Qiang Dong; David R. McMillen (BMC Bioinform., 2008)

Statistical Potential for Modeling and Ranking of Protein-Ligand Interactions. - Hao Fan 002; Dina Schneidman-Duhovny; John J. Irwin; Guang Qiang Dong; Brian K. Shoichet; Andrej Sali (J. Chem. Inf. Model., 2011)

Optimized atomic statistical potentials: assessment of protein interfaces and loops. - Guang Qiang Dong; Hao Fan 002; Dina Schneidman-Duhovny; Ben M. Webb; Andrej Sali (Bioinform., 2013)

Prediction of Substrates for Glutathione Transferases by Covalent Docking. - Guang Qiang Dong; Sara Calhoun; Hao Fan 002; Chakrapani Kalyanaraman; Megan C. Branch; Susan T. Mashiyama; Nir London; Matthew P. Jacobson; Patricia C. Babbitt; Brian K. Shoichet; Richard N. Armstrong; Andrej Sali (J. Chem. Inf. Model., 2014)

ModBase, a database of annotated comparative protein structure models and associated resources. - Ursula Pieper 001; Benjamin M. Webb; Guang Qiang Dong; Dina Schneidman-Duhovny; Hao Fan 002; Seung Joong Kim; Natalia Khuri; Yannick G. Spill; Patrick Weinkam; Michal Hammel; John A. Tainer; Michael Nilges; et al. (Nucleic Acids Res., 2014)