Origin and fate of repeats in bacteria. - Guillaume Achaz; Eduardo P. C. Rocha; P. Netter; Eric Coissac (Nucleic Acids Res., 2002)

Repseek, a tool to retrieve approximate repeats from large DNA sequences. - Guillaume Achaz; Frédéric Boyer; Eduardo P. C. Rocha; Alain Viari; Eric Coissac (Bioinform., 2007)

A Novel Heuristic for Local Multiple Alignment of Interspersed DNA Repeats. - Todd J. Treangen; Aaron E. Darling; Guillaume Achaz; Mark A. Ragan; Xavier Messeguer; Eduardo P. C. Rocha (IEEE ACM Trans. Comput. Biol. Bioinform., 2009)

ViralORFeome: an integrated database to generate a versatile collection of viral ORFs. - Johann Pellet; Lionel Tafforeau; M. Lucas-Hourani; Vincent Navratil; Laurène Meyniel; Guillaume Achaz; A. Guironnet-Paquet; A. Aublin-Gex; Grégory Caignard; P. Cassonnet; A. Chaboud; T. Chantier; et al. (Nucleic Acids Res., 2010)

CNCA aligns small annotated genomes. - Jean-Noël Lorenzi; François Graner; Virginie Courtier-Orgogozo; Guillaume Achaz (BMC Bioinform., 2024)