Factoring tertiary classification into binary classification improves neural network for protein secondary structure prediction. - Wei Zhong; Gulsah Altun; Hae-Jin Hu; Robert W. Harrison; Phang C. Tai; Yi Pan 001 (CIBCB, 2004)

Discovery of Local protein sequence motifs using Improved k-means Clustering Technique. - Wei Zhong; Gulsah Altun; Robert W. Harrison; Phang C. Tai; Yi Pan 001 (Advances in Bioinformatics and Its Applications, 2005)

Mining Protein Sequence Motifs Representing Common 3D Structures. - Wei Zhong; Gulsah Altun; Robert W. Harrison; Phang C. Tai; Yi Pan 001 (CSB Workshops, 2005)

A New Seed Selection Algorithm that Maximizes Local Structural Similarity in Proteins. - Gulsah Altun; Wei Zhong; Yi Pan 001; Phang C. Tai; Robert W. Harrison (EMBC, 2006)

Hybrid SVM Kernels for Protein Secondary Structure Prediction. - Gulsah Altun; Hae-Jin Hu; Dumitru Brinza; Robert W. Harrison; Alexander Zelikovsky; Yi Pan 001 (GrC, 2006)

Haplotype tagging using support vector machines. - Jingwu He; Jun Zhang; Gulsah Altun; Alexander Zelikovsky; Yanqing Zhang 001 (GrC, 2006)

Efficient, Secure, Dynamic Source Routing for Ad-hoc Networks. - Michael Weeks; Gulsah Altun (J. Netw. Syst. Manag., 2006)

A Feature Selection Algorithm Based on Graph Theory and Random Forests for Protein Secondary Structure Prediction. - Gulsah Altun; Hae-Jin Hu; Stefan Gremalschi; Robert W. Harrison; Yi Pan 001 (ISBRA, 2007)

Parallel protein secondary structure prediction schemes using Pthread and OpenMP over hyper-threading technology. - Wei Zhong; Gulsah Altun; Xinmin Tian; Robert W. Harrison; Phang C. Tai; Yi Pan 001 (J. Supercomput., 2007)

Mean Squared Residue Based Biclustering Algorithms. - Stefan Gremalschi; Gulsah Altun (ISBRA, 2008)

Mean Square Residue Biclustering with Missing Data and Row Inversions. - Stefan Gremalschi; Gulsah Altun; Irina Astrovskaya; Alexander Zelikovsky (ISBRA, 2009)