Pattern recognition of gene expression data on biochemical networks with simple wavelet transforms. - Gunnar Schramm; Marcus Oswald; Hanna Seitz; Sebastian Sager; Marc Zapatka; Gerhard Reinelt; Roland Eils; Rainer König (LWA, 2006)

Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms. - Rainer König; Gunnar Schramm; Marcus Oswald; Hanna Seitz; Sebastian Sager; Marc Zapatka; Gerhard Reinelt; Roland Eils (BMC Bioinform., 2006)

Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation of Escherichia coli. - Gunnar Schramm; Marc Zapatka; Roland Eils; Rainer König (BMC Bioinform., 2007)

Analyzing the regulation of metabolic pathways in human breast cancer. - Eva-Maria Surmann; Gunnar Schramm; Stefan Wiesberg; Marcus Oswald; Gerhard Reinelt; Roland Eils; Rainer König (LWA, 2009)

PathWave: discovering patterns of differentially regulated enzymes in metabolic pathways. - Gunnar Schramm; Stefan Wiesberg; Nicolle Diessl; Anna-Lena Kranz; Vitalia Sagulenko; Marcus Oswald; Gerhard Reinelt; Frank Westermann; Roland Eils; Rainer König (Bioinform., 2010)

Regulation patterns in signaling networks of cancer. - Gunnar Schramm; Nandakumar Kannabiran; Rainer König (BMC Syst. Biol., 2010)

Network topology-based detection of differential gene regulation and regulatory switches in cell metabolism and signaling. - Rosario M. Piro; Stefan Wiesberg; Gunnar Schramm; Nico Rebel; Marcus Oswald; Roland Eils; Gerhard Reinelt; Rainer König (BMC Syst. Biol., 2014)