A computational analysis of the binding model of MDM2 with inhibitors. - Guodong Hu; Dunyou Wang; Xinguo Liu; Qinggang Zhang (J. Comput. Aided Mol. Des., 2010)

Ligand Selectivity Mechanism and Conformational Changes in Guanine Riboswitch by Molecular Dynamics Simulations and Free Energy Calculations. - Guodong Hu; Aijing Ma; Jihua Wang (J. Chem. Inf. Model., 2017)

EVLncRNAs: a manually curated database for long non-coding RNAs validated by low-throughput experiments. - Bailing Zhou; Huiying Zhao; Jia-Feng Yu; Chengang Guo; Xianghua Dou; Feng Song; Guodong Hu; Zanxia Cao; Yuanxu Qu; Yuedong Yang; Yaoqi Zhou; Jihua Wang (Nucleic Acids Res., 2018)

PRobPlan: A Framework of Integrating Probabilistic Planning Into ROS. - Dongning Rao; Guodong Hu; Zhihua Jiang (IEEE Access, 2020)

All-Atom Knowledge-Based Potential for RNA Structure Discrimination Based on the Distance-Scaled Finite Ideal-Gas Reference State. - Tongchuan Zhang; Guodong Hu; Yuedong Yang; Jihua Wang; Yaoqi Zhou (J. Comput. Biol., 2020)

EVLncRNAs 2.0: an updated database of manually curated functional long non-coding RNAs validated by low-throughput experiments. - Bailing Zhou; Baohua Ji; Kui Liu; Guodong Hu; Fei Wang; Qingshuai Chen; Ru Yu; Pingping Huang; Jing Ren; Chengang Guo; Huiying Zhao; Hongmei Zhang; et al. (Nucleic Acids Res., 2021)

Binding free energy decomposition and multiple unbinding paths of buried ligands in a PreQ1 riboswitch. - Guodong Hu; Huan-Xiang Zhou (PLoS Comput. Biol., 2021)

Decoding the Identification Mechanism of an SAM-III Riboswitch on Ligands through Multiple Independent Gaussian-Accelerated Molecular Dynamics Simulations. - Jianzhong Chen; Qingkai Zeng; Wei Wang; Haibo Sun; Guodong Hu (J. Chem. Inf. Model., 2022)

Conformations of KRAS4B Affected by Its Partner Binding and G12C Mutation: Insights from GaMD Trajectory-Image Transformation-Based Deep Learning. - Jianzhong Chen; Jian Wang 123; Wanchun Yang; Lu Zhao; Guodong Hu (J. Chem. Inf. Model., 2024)

Unveiling Putative Excited State and Transmission of Binding Information in the Fluoride Riboswitch. - Guodong Hu; Xue Yu; Zhaojun Li (J. Chem. Inf. Model., 2024)