Open-ended on-board Evolutionary Robotics for robot swarms. - Guy Baele; Nicolas Bredèche; Evert Haasdijk; Steven Maere; Nico K. Michiels; Yves Van de Peer; Thomas Schmickl; Christopher S. F. Schwarzer; Ronald Thenius (IEEE Congress on Evolutionary Computation, 2009)

A bio-inspired agent-based system for controlling robot behaviour. - Yao Yao; Guy Baele; Yves Van de Peer (IEEE IA, 2011)

Reconstruction of an HIV Transmission History in a Bayesian Coalescent Framework. - Bram Vrancken; Andrew Rambaut; Guy Baele; Anne-Mieke Vandamme; Kristel Van Laethem; Eric Van Wijngaerden; Alexei J. Drummond; Marc A. Suchard; Philippe Lemey (IWBBIO, 2013)

Bayesian evolutionary model testing in the phylogenomics era: matching model complexity with computational efficiency. - Guy Baele; Philippe Lemey (Bioinform., 2013)

Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolution. - Guy Baele; Philippe Lemey; Stijn Vansteelandt (BMC Bioinform., 2013)

πBUSS: a parallel BEAST/BEAGLE utility for sequence simulation under complex evolutionary scenarios. - Filip Bielejec; Philippe Lemey; Luiz Carvalho; Guy Baele; Andrew Rambaut; Marc A. Suchard (BMC Bioinform., 2014)

The Genealogical Population Dynamics of HIV-1 in a Large Transmission Chain: Bridging within and among Host Evolutionary Rates. - Bram Vrancken; Andrew Rambaut; Marc A. Suchard; Alexei J. Drummond; Guy Baele; Inge Derdelinckx; Eric Van Wijngaerden; Anne-Mieke Vandamme; Kristel Van Laethem; Philippe Lemey (PLoS Comput. Biol., 2014)

Adaptive MCMC in Bayesian phylogenetics: an application to analyzing partitioned data in BEAST. - Guy Baele; Philippe Lemey; Andrew Rambaut; Marc A. Suchard (Bioinform., 2017)

PhyloGeoTool: interactively exploring large phylogenies in an epidemiological context. - Pieter Libin; Ewout Vanden Eynden; Francesca Incardona; Ann Nowé; Antonia Bezenchek; EucoHIV Study Group; Anders Sönnerborg; Anne-Mieke Vandamme; Kristof Theys; Guy Baele (Bioinform., 2017)

Virus genomes reveal factors that spread and sustained the Ebola epidemic. - Gytis Dudas; Luiz Max Carvalho; Trevor Bedford; Andrew J. Tatem; Guy Baele; Nuno R. Faria; Daniel J. Park; Jason T. Ladner; Armando Arias; Danny Asogun; Filip Bielejec; Sarah L. Caddy; et al. (Nat., 2017)

Incorporating heterogeneous sampling probabilities in continuous phylogeographic inference - Application to H5N1 spread in the Mekong region. - Simon Dellicour; Philippe Lemey; Jean Artois; Tommy T. Lam; Alice Fusaro; Isabella Monne; Giovanni Cattoli; Dmitry Kuznetsov; Ioannis Xenarios; Gwenaelle Dauphin; Wantanee Kalpravidh; Sophie von Dobschütz; et al. (Bioinform., 2020)

Massive Parallelization Boosts Big Bayesian Multidimensional Scaling. - Andrew J. Holbrook; Philippe Lemey; Guy Baele; Simon Dellicour; Dirk Brockmann; Andrew Rambaut; Marc A. Suchard (J. Comput. Graph. Stat., 2021)

Sampling bias and model choice in continuous phylogeography: Getting lost on a random walk. - Antanas Kalkauskas; Umberto Perron; Yuxuan Sun; Nick Goldman; Guy Baele; Stéphane Guindon; Nicola De Maio (PLoS Comput. Biol., 2021)

Many-core algorithms for high-dimensional gradients on phylogenetic trees. - Karthik Gangavarapu; Xiang Ji; Guy Baele; Mathieu Fourment; Philippe Lemey; Frederick A. Matsen IV; Marc A. Suchard (Bioinform., 2024)