BioMeKe : an ontology-based biomedical knowledge extraction system devoted to transcriptome analysis. - Gwenaëlle Marquet; Anita Burgun; Fouzia Moussouni; Emilie Guérin; Franck Le Duff; Olivier Loréal (MIE, 2003)

MeSH and Specialized Terminologies : Coverage in the Field of Molecular Biology. - Vincent Mary; Gwenaëlle Marquet; Pierre Le Beux (MedInfo, 2004)

Integrating and Warehousing Liver Gene Expression Data and Related Biomedical Resources in GEDAW. - Emilie Guérin; Gwenaëlle Marquet; Anita Burgun; Olivier Loréal; Laure Berti-Équille; Ulf Leser; Fouzia Moussouni (DILS, 2005)

Aligning biomedical ontologies using lexical methods and the UMLS: the case of Disease ontologies. - Gwenaëlle Marquet; Jean Mosser; Anita Burgun (MIE, 2006)

Combining biomedical knowledge and transcriptomic data to extract new knowledge on genes. - Emilie Guérin; Gwenaëlle Marquet; Julie Chabalier; Marie-Bérengère Troadec; Christiane Guguen-Guillouzo; Olivier Loréal; Anita Burgun; Fouzia Moussouni (J. Integr. Bioinform., 2006)

Grading glioma tumors using OWL-DL and NCI Thesaurus. - Gwenaëlle Marquet; Olivier Dameron; Stephan Saikali; Jean Mosser; Anita Burgun (AMIA, 2007)

A method exploiting syntactic patterns and the UMLS semantics for aligning biomedical ontologies: The case of OBO disease ontologies. - Gwenaëlle Marquet; Jean Mosser; Anita Burgun (Int. J. Medical Informatics, 2007)