Bio-Ontology and text: bridging the modeling gap. - Carol Friedman; Tara Borlawsky; Lyudmila Shagina; H. Rosie Xing; Yves A. Lussier (Bioinform., 2006)

Stromal microenvironment processes unveiled by biological component analysis of gene expression in xenograft tumor models. - Xinan Yang; Younghee Lee; Yong Huang; James L. Chen; H. Rosie Xing; Yves A. Lussier (BMC Bioinform., 2010)

Protein interaction network underpins concordant prognosis among heterogeneous breast cancer signatures. - James L. Chen; Lee T. Sam; Yong Huang; Younghee Lee; Jianrong Li; Yang Liu 023; H. Rosie Xing; Yves A. Lussier (J. Biomed. Informatics, 2010)

Network Modeling Identifies Molecular Functions Targeted by miR-204 to Suppress Head and Neck Tumor Metastasis. - Younghee Lee; Xinan Yang; Yong Huang; Hanli Fan; Qingbei Zhang; Youngfei Wu; Jianrong Li; Rifat Hasina; Chao Cheng; Mark W. Lingen; Mark B. Gerstein; Ralph R. Weichselbaum; et al. (PLoS Comput. Biol., 2010)

Towards Mechanism Classifiers: Expression-anchored Gene Ontology Signature Predicts Clinical Outcome in Lung Adenocarcinoma Patients. - Xinan Yang; Haiquan Li; Kelly Regan; Jianrong Li; Yong Huang; H. Rosie Xing; Yves A. Lussier (AMIA, 2012)

Single Sample Expression-Anchored Mechanisms Predict Survival in Head and Neck Cancer. - Xinan Yang; Kelly Regan; Yong Huang; Qingbei Zhang; Jianrong Li; Tanguy Y. Seiwert; Ezra E. W. Cohen; H. Rosie Xing; Yves A. Lussier (PLoS Comput. Biol., 2012)