Genome annotation in the presence of insertional RNA editing. - Christina Beargie; Tsunglin Liu; Mark Corriveau; Ha Youn Lee; Jonatha Gott; Ralf Bundschuh (Bioinform., 2008)

Dynamic Correlation between Intrahost HIV-1 Quasispecies Evolution and Disease Progression. - Ha Youn Lee; Alan S. Perelson; Su-Chan Park; Thomas Leitner (PLoS Comput. Biol., 2008)

SPMM: estimating infection duration of multivariant HIV-1 infections. - Tanzy M. T. Love; Sung Yong Park; Elena E. Giorgi; Wendy J. Mack; Alan S. Perelson; Ha Youn Lee (Bioinform., 2016)

HIITE: HIV-1 incidence and infection time estimator. - Sung Yong Park; Tanzy M. T. Love; Shivankur Kapoor; Ha Youn Lee (Bioinform., 2018)

CCMP: Software-as-a-service approach for fully-automated microbiome profiling. - Sung Yong Park; Sayan Nanda; Gina Faraci; Younghu Park; Ha Youn Lee (J. Biomed. Informatics X, 2019)