STARNET 2: a web-based tool for accelerating discovery of gene regulatory networks using microarray co-expression data. - Daniel Jupiter; Hailin Chen; Vincent VanBuren (BMC Bioinform., 2009)

A Refined and Heuristic Algorithm for LD tagSNPs Selection. - Hailin Chen; Zuping Zhang 001; Jing Xia (TrustCom, 2011)

Network-Based Inference Methods for Drug Repositioning. - Hailin Chen; Heng Zhang 002; Zuping Zhang 001; Yiqin Cao; Wenliang Tang (Comput. Math. Methods Medicine, 2015)

Application of Transfer Learning Approaches in Multimodal Wearable Human Activity Recognition. - Hailin Chen; Shengping Cui; Sebastian Li (CoRR, 2017)

MPC Control and Path Planning of Omni-Directional Mobile Robot with Potential Field Method. - Xiaofeng Liu 006; Hailin Chen; Chengcheng Wang; Fang Hu; Xianqiang Yang 001 (RCAR, 2018)

Prediction of Drug-Disease Associations for Drug Repositioning Through Drug-miRNA-Disease Heterogeneous Network. - Hailin Chen; Zuping Zhang 001 (IEEE Access, 2018)

Beyond Word for Word: Fact Guided Training for Neural Data-to-Document Generation. - Feng Nie; Hailin Chen; Jinpeng Wang 001; Rong Pan; Chin-Yew Lin (NLPCC (1), 2019)

Relating Disease-Gene Interaction Network With Disease-Associated ncRNAs. - Hailin Chen; Zuping Zhang 001; Guanghui Li 003 (IEEE Access, 2019)

Prediction and interpretation of miRNA-disease associations based on miRNA target genes using canonical correlation analysis. - Hailin Chen; Zuping Zhang 001; Dayi Feng (BMC Bioinform., 2019)

Domain Adaptation for Degraded Remote Scene Classification. - Jianfei Yang; Hailin Chen; Yuecong Xu; Ziji Shi; Ruikang Luo; Lihua Xie 001; Rong Su 001 (ICARCV, 2020)

Comparative analysis of similarity measurements in miRNAs with applications to miRNA-disease association predictions. - Hailin Chen; Ruiyu Guo; Guanghui Li 003; Wei Zhang 079; Zuping Zhang 001 (BMC Bioinform., 2020)

Potential circRNA-disease association prediction using DeepWalk and network consistency projection. - Guanghui Li 003; Jiawei Luo 001; Diancheng Wang; Cheng Liang 001; Qiu Xiao; Pingjian Ding; Hailin Chen (J. Biomed. Informatics, 2020)

Deep Learning Approach for Long- Term Prediction of Electric Vehicle (EV) Charging Station Availability. - Ruikang Luo; Yicheng Zhang 001; Yao Zhou; Hailin Chen; Le Yang; Jianfei Yang; Rong Su 001 (ITSC, 2021)

In silico drug repositioning based on the integration of chemical, genomic and pharmacological spaces. - Hailin Chen; Zuping Zhang 001; Jingpu Zhang (BMC Bioinform., 2021)

Learning Label Modular Prompts for Text Classification in the Wild. - Hailin Chen; Amrita Saha; Shafiq R. Joty; Steven C. H. Hoi (EMNLP, 2022)

Predicting miRNA-disease associations based on graph attention networks and dual Laplacian regularized least squares. - Wengang Wang; Hailin Chen (Briefings Bioinform., 2022)

Predicting potential miRNA-disease associations based on more reliable negative sample selection. - Ruiyu Guo; Hailin Chen; Wengang Wang; Guangsheng Wu; Fangliang Lv (BMC Bioinform., 2022)

Personalized Distillation: Empowering Open-Sourced LLMs with Adaptive Learning for Code Generation. - Hailin Chen; Amrita Saha; Steven Chu-Hong Hoi; Shafiq Joty (EMNLP, 2023)

Retrieving Multimodal Information for Augmented Generation: A Survey. - Ruochen Zhao; Hailin Chen; Weishi Wang; Fangkai Jiao; Do Xuan Long; Chengwei Qin; Bosheng Ding; Xiaobao Guo; Minzhi Li; Xingxuan Li; Shafiq Joty (EMNLP (Findings), 2023)

PromptSum: Parameter-Efficient Controllable Abstractive Summarization. - Mathieu Ravaut; Hailin Chen; Ruochen Zhao; Chengwei Qin; Shafiq Joty; Nancy F. Chen (CoRR, 2023)

Personalised Distillation: Empowering Open-Sourced LLMs with Adaptive Learning for Code Generation. - Hailin Chen; Amrita Saha; Steven C. H. Hoi; Shafiq Joty (CoRR, 2023)

ChatGPT's One-year Anniversary: Are Open-Source Large Language Models Catching up? - Hailin Chen; Fangkai Jiao; Xingxuan Li; Chengwei Qin; Mathieu Ravaut; Ruochen Zhao; Caiming Xiong; Shafiq Joty (CoRR, 2023)

Predicting miRNA-disease associations based on lncRNA-miRNA interactions and graph convolution networks. - Wengang Wang; Hailin Chen (Briefings Bioinform., 2023)

Predicting circRNA-drug sensitivity associations by learning multimodal networks using graph auto-encoders and attention mechanism. - Bo Yang; Hailin Chen (Briefings Bioinform., 2023)

CodeChain: Towards Modular Code Generation Through Chain of Self-revisions with Representative Sub-modules. - Hung Le 003; Hailin Chen; Amrita Saha; Akash Gokul; Doyen Sahoo; Shafiq Joty (ICLR, 2024)

Predicting disease-associated microbes based on similarity fusion and deep learning. - Hailin Chen; Kuan Chen (Briefings Bioinform., 2024)

How Much are LLMs Contaminated? A Comprehensive Survey and the LLMSanitize Library. - Mathieu Ravaut; Bosheng Ding; Fangkai Jiao; Hailin Chen; Xingxuan Li; Ruochen Zhao; Chengwei Qin; Caiming Xiong; Shafiq Joty (CoRR, 2024)

SFR-RAG: Towards Contextually Faithful LLMs. - Xuan-Phi Nguyen; Shrey Pandit; Senthil Purushwalkam; Austin Xu; Hailin Chen; Yifei Ming; Zixuan Ke; Silvio Savarese; Caiming Xong; Shafiq Joty (CoRR, 2024)

StructTest: Benchmarking LLMs' Reasoning through Compositional Structured Outputs. - Hailin Chen; Fangkai Jiao; Mathieu Ravaut; Nawshad Farruque; Xuan-Phi Nguyen; Chengwei Qin; Manan Dey; Bosheng Ding; Caiming Xiong; Shafiq Joty; Yingbo Zhou (CoRR, 2024)

Archive or exhibition?: A comparative case study of the real and virtual Pitt Rivers Museum. - Hailin Chen; Jonathan Hale; Laura Hanks (Digit. Appl. Archaeol. Cult. Heritage, 2024)

Enhancing Aboveground Biomass Prediction through Integration of the SCDR Paradigm into the U-Like Hierarchical Residual Fusion Model. - Ruofan Zhang; Jialiang Peng; Hailin Chen; Hao Peng; Yi Wang; Ping Jiang (Sensors, 2024)

Ensemble learning based on matrix completion improves microbe-disease association prediction. - Hailin Chen; Kuan Chen (Briefings Bioinform., 2025)

A Comprehensive Survey of Contamination Detection Methods in Large Language Models. - Mathieu Ravaut; Bosheng Ding; Fangkai Jiao; Hailin Chen; Xingxuan Li; Ruochen Zhao; Chengwei Qin; Caiming Xiong; Shafiq Joty (Trans. Mach. Learn. Res., 2025)