MUSCLE: multi-view and multi-scale attentional feature fusion for microRNA-disease associations prediction. - Boya Ji; Haitao Zou 001; Liwen Xu; Xiaolan Xie; Shaoliang Peng (Briefings Bioinform., 2024)

Multi-Task Prompt-Aware Therapeutic Peptide Generation by Protein Language Model. - Jinhong Li; Haitao Zou 001; Zhijin Wang; Shaoliang Peng (BIBM, 2025)

ChaiSite: An Accurate Method for Protein-Nucleic Acid Binding Site Prediction Based on a Complex Structure Prediction Network. - Yi Li; Wenwu Zeng; Xiaolan Xie; Feng Hu; Haitao Zou 001; Shaoliang Peng (BIBM, 2025)

ShennongMGS: An LLM-based Chinese Medication Guidance System. - Yutao Dou; Yuwei Huang; Xiongjun Zhao; Haitao Zou 001; Jiandong Shang; Ying Lu; Xiaolin Yang; Jian Xiao; Shaoliang Peng (ACM Trans. Manag. Inf. Syst., 2025)

A survey on electronic health record driven multimodal representation learning. - Yutao Dou; Yaoyu Liu; Haitao Zou 001; Wenwu Zeng; Kele Xu; Shaoliang Peng (Inf. Fusion, 2026)