A novel network-based method for measuring the functional relationship between gene sets. - Qianghu Wang; Jie Sun 021; Meng Zhou 003; Haixiu Yang; Yan Li; Xiang Li; Sali Lv; Xia Li 004; Yixue Li (Bioinform., 2011)

Topologically inferring risk-active pathways toward precise cancer classification by directed random walk. - Wei Liu 187; Chunquan Li 002; Yanjun Xu; Haixiu Yang; Qianlan Yao; Junwei Han 003; Desi Shang; Chunlong Zhang; Fei Su; Xiaoxi Li; Yun Xiao 001; Fan Zhang; et al. (Bioinform., 2013)

The detection of risk pathways, regulated by miRNAs, via the integration of sample-matched miRNA-mRNA profiles and pathway structure. - Jing Li 115; Chunquan Li 002; Junwei Han 003; Chunlong Zhang; Desi Shang; Qianlan Yao; Yunpeng Zhang; Yanjun Xu; Wei Liu 187; Meng Zhou 003; Haixiu Yang; Fei Su; et al. (J. Biomed. Informatics, 2014)

BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases. - Yanjun Xu; Haixiu Yang; Tan Wu; Qun Dong; Zeguo Sun; Desi Shang; Feng Li; Yingqi Xu; Fei Su; Siyao Liu; Yunpeng Zhang; Xia Li 004 (Database J. Biol. Databases Curation, 2017)

MetSigDis: a manually curated resource for the metabolic signatures of diseases. - Liang Cheng 006; Haixiu Yang; Hengqiang Zhao; Xiaoya Pei; Hongbo Shi; Jie Sun 021; Yunpeng Zhang; Zhenzhen Wang; Meng Zhou 003 (Briefings Bioinform., 2019)

RNAactDrug: a comprehensive database of RNAs associated with drug sensitivity from multi-omics data. - Qun Dong; Feng Li; Yanjun Xu; Jing Xiao; Yingqi Xu; Desi Shang; Chunlong Zhang; Haixiu Yang; Zihan Tian; Kai Mi 003; Xia Li 004; Yunpeng Zhang (Briefings Bioinform., 2020)

Identification and comprehensive characterization of lncRNAs with copy number variations and their driving transcriptional perturbed subpathways reveal functional significance for cancer. - Yanjun Xu; Tan Wu; Feng Li; Qun Dong; Jingwen Wang; Desi Shang; Yingqi Xu; Chunlong Zhang; Yiying Dou; Congxue Hu; Haixiu Yang; Xuan Zheng; et al. (Briefings Bioinform., 2020)

gutMGene: a comprehensive database for target genes of gut microbes and microbial metabolites. - Liang Cheng 006; Changlu Qi; Haixiu Yang; Minke Lu; Yiting Cai; Tongze Fu; Jialiang Ren; Qu Jin; Xue Zhang (Nucleic Acids Res., 2022)