Fragment assembly with double-barreled data. - Pavel A. Pevzner; Haixu Tang (ISMB (Supplement of Bioinformatics), 2001)

A new approach to fragment assembly in DNA sequencing. - Pavel A. Pevzner; Haixu Tang; Michael S. Waterman (RECOMB, 2001)

A New Estimator of Significance of Correlation in Time Series Data. - Semyon Kruglyak; Haixu Tang (J. Comput. Biol., 2001)

Splicing graphs and EST assembly problem. - Steffen Heber; Max A. Alekseyev; Sing-Hoi Sze; Haixu Tang; Pavel A. Pevzner (ISMB, 2002)

De novo repeat classification and fragment assembly. - Pavel A. Pevzner; Haixu Tang; Glenn Tesler (RECOMB, 2004)

Fragment assembly with short reads. - Mark Chaisson; Pavel A. Pevzner; Haixu Tang (Bioinform., 2004)

MedBlast: searching articles related to a biological sequence. - Qiang Tu; Haixu Tang; Dafu Ding (Bioinform., 2004)

Automated interpretation of MS/MS spectra of oligosaccharides. - Haixu Tang; Yehia Mechref; Milos V. Novotny (ISMB (Supplement of Bioinformatics), 2005)

A computational approach toward label-free protein quantification using predicted peptide detectability. - Haixu Tang; Randy J. Arnold; Pedro Alves; Zhiyin Xun; David E. Clemmer; Milos V. Novotny; James P. Reilly; Predrag Radivojac (ISMB (Supplement of Bioinformatics), 2006)

A Machine Learning Approach to Predicting Peptide Fragmentation Spectra. - Randy J. Arnold; Narmada Jayasankar; Divya Aggarwal; Haixu Tang; Predrag Radivojac (Pacific Symposium on Biocomputing, 2006)

A Computational Approach for the Identification of Site-Specific Protein Glycosylations Through Ion-Trap Mass Spectrometry. - Yin Wu; Yehia Mechref; Iveta Klouckova; Milos V. Novotny; Haixu Tang (Systems Biology and Computational Proteomics, 2006)

An Approximate de Bruijn Graph Approach to Multiple Local Alignment and Motif Discovery in Protein Sequences. - Rupali Patwardhan; Haixu Tang; Sun Kim; Mehmet M. Dalkilic (VDMB, 2006)

Consensus Folding of Unaligned RNA Sequences Revisited. - Vineet Bafna; Haixu Tang; Shaojie Zhang 001 (J. Comput. Biol., 2006)

Bioinformatics: Mining the Massive Data from High Throughput Genomics Experiments. - Haixu Tang; Sun Kim (Analysis of Biological Data: A Soft Computing Approach, 2007)

Advancement in Protein Inference from Shotgun Proteomics Using Peptide Detectability. - Pedro Alves; Randy J. Arnold; Milos V. Novotny; Predrag Radivojac; James P. Reilly; Haixu Tang (Pacific Symposium on Biocomputing, 2007)

dPattern: transcription factor binding site (TFBS) discovery in human genome using a discriminative pattern analysis. - Seung-Hee Bae; Haixu Tang; Jing Wu; Jun Xie; Sun Kim (Bioinform., 2007)

Correcting Base-Assignment Errors in Repeat Regions of Shotgun Assembly. - Degui Zhi; Uri Keich; Pavel A. Pevzner; Steffen Heber; Haixu Tang (IEEE ACM Trans. Comput. Biol. Bioinform., 2007)

Fast and accurate identification of semi-tryptic peptides in shotgun proteomics. - Pedro Alves; Randy J. Arnold; David E. Clemmer; Yixue Li; James P. Reilly; Quanhu Sheng; Haixu Tang; Zhiyin Xun; Rong Zeng; Predrag Radivojac (Bioinform., 2008)

A machine-learning approach to combined evidence validation of genome assemblies. - Jeong-Hyeon Choi; Sun Kim; Haixu Tang; Justen Andrews; Don G. Gilbert; John Colbourne (Bioinform., 2008)

Learning your identity and disease from research papers: information leaks in genome wide association study. - Rui Wang 010; Yong Fuga Li; XiaoFeng Wang 001; Haixu Tang; Xiao-yong Zhou (CCS, 2009)

Privacy-preserving genomic computation through program specialization. - Rui Wang 010; XiaoFeng Wang 001; Zhou Li 001; Haixu Tang; Michael K. Reiter; Zheng Dong (CCS, 2009)

Biomedical Case Studies in Data Intensive Computing. - Geoffrey C. Fox; Xiaohong Qiu; Scott Beason; Jong Youl Choi; Jaliya Ekanayake; Thilina Gunarathne; Mina Rho; Haixu Tang; Neil Devadasan; Gilbert C. Liu (CloudCom, 2009)

An Orfome Assembly Approach to Metagenomics Sequences Analysis. - Yuzhen Ye; Haixu Tang (J. Bioinform. Comput. Biol., 2009)

A Bayesian Approach to Protein Inference Problem in Shotgun Proteomics. - Yong Fuga Li; Randy J. Arnold; Yixue Li; Predrag Radivojac; Quanhu Sheng; Haixu Tang (J. Comput. Biol., 2009)

To Release or Not to Release: Evaluating Information Leaks in Aggregate Human-Genome Data. - Xiao-yong Zhou; Bo Peng; Yong Fuga Li; Yangyi Chen; Haixu Tang; XiaoFeng Wang 001 (ESORICS, 2011)

Comparing Bacterial Communities Inferred from 16s Rrna Gene Sequencing and Shotgun Metagenomics. - Neethu Shah; Haixu Tang; Thomas G. Doak; Yuzhen Ye (Pacific Symposium on Biocomputing, 2011)

Enhanced peptide quantification using spectral count clustering and cluster abundance. - Seungmook Lee; Min-Seok Kwon; Hyoung-Joo Lee; Young-Ki Paik; Haixu Tang; Jae K. Lee; Taesung Park (BMC Bioinform., 2011)

RAPSearch: a Fast Protein Similarity Search Tool for Short Reads. - Yuzhen Ye; Jeong-Hyeon Choi; Haixu Tang (BMC Bioinform., 2011)

DACIDR: deterministic annealed clustering with interpolative dimension reduction using a large collection of 16S rRNA sequences. - Yang Ruan; Saliya Ekanayake; Mina Rho; Haixu Tang; Seung-Hee Bae; Judy Qiu; Geoffrey C. Fox (BCB, 2012)

Privacy Protection in Sharing Personal Genome Sequencing Data. - XiaoFeng Wang 001; Haixu Tang (HISB, 2012)

Large-Scale Privacy-Preserving Mapping of Human Genomic Sequences on Hybrid Clouds. - Yangyi Chen; Bo Peng; XiaoFeng Wang 001; Haixu Tang (NDSS, 2012)

RAPSearch2: a fast and memory-efficient protein similarity search tool for next-generation sequencing data. - Yongan Zhao; Haixu Tang; Yuzhen Ye (Bioinform., 2012)

Detecting structural variants involving repetitive elements: capturing transposition events of IS elements in the genome of Escherichia coli. - Heewook Lee; Ellen Popodi; Patricia L. Foster; Haixu Tang (BMC Bioinform., 2012)

A de Bruijn Graph Approach to the Quantification of Closely-Related Genomes in a Microbial Community. - Mingjie Wang; Yuzhen Ye; Haixu Tang (J. Comput. Biol., 2012)

Improving phosphopeptide identification in shotgun proteomics by supervised filtering of peptide-spectrum matches. - Sujun Li; Randy J. Arnold; Haixu Tang; Predrag Radivojac (BCB, 2013)

Automated annotation and quantification of glycans using liquid chromatography-mass spectrometry. - Chuan-Yih Yu; Anoop M. Mayampurath; Yunli Hu; Shiyue Zhou; Yehia Mechref; Haixu Tang (Bioinform., 2013)

Probabilistic Inference of Biochemical Reactions in Microbial Communities from Metagenomic Sequences. - Dazhi Jiao; Yuzhen Ye; Haixu Tang (PLoS Comput. Biol., 2013)

Quasispecies reconstruction based on vertex coloring algorithms. - Diyue Bu; Haixu Tang (BIBM, 2014)

Identification and characterization of accessory genomes in bacterial species based on genome comparison and metagenomic recruitment. - Mingjie Wang; Haixu Tang; Yuzhen Ye (BIBM, 2014)

Integration of Clustering and Multidimensional Scaling to Determine Phylogenetic Trees as Spherical Phylograms Visualized in 3 Dimensions. - Yang Ruan; Geoffrey L. House; Saliya Ekanayake; Ursel Schutte; James D. Bever; Haixu Tang; Geoffrey C. Fox (CCGRID, 2014)

Gene finding in metatranscriptomic sequences. - Wazim Ismail; Yuzhen Ye; Haixu Tang (BMC Bioinform., 2014)

Detection of Structural Variants Involving Repetitive Regions in the Reference Genome. - Heewook Lee; Ellen Popodi; Patricia L. Foster; Haixu Tang (J. Comput. Biol., 2014)

A community assessment of privacy preserving techniques for human genomes. - Xiaoqian Jiang; Yongan Zhao; Xiaofeng Fang; Bradley A. Malin; Shuang Wang 002; Lucila Ohno-Machado; Haixu Tang (BMC Medical Informatics Decis. Mak., 2014)

A maximum-likelihood approach to absolute protein quantification in mass spectrometry. - Chao Ji; Yong Fuga Li; Earl P. Bellinger; Sujun Li; Randy J. Arnold; Predrag Radivojac; Haixu Tang (BCB, 2015)

Efficient Genome-Wide, Privacy-Preserving Similar Patient Query based on Private Edit Distance. - Xiao Shaun Wang; Yan Huang 001; Yongan Zhao; Haixu Tang; XiaoFeng Wang 001; Diyue Bu (CCS, 2015)

Choosing blindly but wisely: differentially private solicitation of DNA datasets for disease marker discovery. - Yongan Zhao; XiaoFeng Wang 001; Xiaoqian Jiang; Lucila Ohno-Machado; Haixu Tang (J. Am. Medical Informatics Assoc., 2015)

On the Privacy Risks of Sharing Clinical Proteomics Data. - Sujun Li; Nuno Bandeira; XiaoFeng Wang 001; Haixu Tang (CRI, 2016)

MGEScan: a Galaxy-based system for identifying retrotransposons in genomes. - Hyungro Lee; Min Su Lee; Wazim Mohammed Ismail; Mina Rho; Geoffrey C. Fox; Sangyoon Oh 001; Haixu Tang (Bioinform., 2016)

Utilizing de Bruijn graph of metagenome assembly for metatranscriptome analysis. - Yuzhen Ye; Haixu Tang (Bioinform., 2016)

A Graph-Centric Approach for Metagenome-Guided Peptide and Protein Identification in Metaproteomics. - Haixu Tang; Sujun Li; Yuzhen Ye (PLoS Comput. Biol., 2016)

A Sparse Latent Regression Approach for Integrative Analysis of Glycomic and Glycotranscriptomic Data. - Xuefu Wang; Sujun Li; Wenjing Peng; Yehia Mechref; Haixu Tang (BCB, 2017)

Leaky Cauldron on the Dark Land: Understanding Memory Side-Channel Hazards in SGX. - Wenhao Wang 001; Guoxing Chen; Xiaorui Pan; Yinqian Zhang; XiaoFeng Wang 001; Vincent Bindschaedler; Haixu Tang; Carl A. Gunter (CCS, 2017)

ISEScan: automated identification of insertion sequence elements in prokaryotic genomes. - Zhiqun Xie; Haixu Tang (Bioinform., 2017)

STRScan: targeted profiling of short tandem repeats in whole-genome sequencing data. - Haixu Tang; Etienne Nzabarushimana (BMC Bioinform., 2017)

Improving de novo metatranscriptome assembly via machine learning algorithms. - Hussein Mohsen; Haixu Tang; Yuzhen Ye (Int. J. Comput. Biol. Drug Des., 2017)

Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks. - Jean Louis Raisaro; Florian Tramèr; Zhanglong Ji; Diyue Bu; Yongan Zhao; W. Knox Carey; David D. Lloyd; Heidi Sofia; Dixie Baker; Paul Flicek; Suyash S. Shringarpure; Carlos D. Bustamante; et al. (J. Am. Medical Informatics Assoc., 2017)

Smooth q-Gram, and Its Applications to Detection of Overlaps among Long, Error-Prone Sequencing Reads. - Haoyu Zhang; Qin Zhang 001; Haixu Tang (CIKM, 2018)

Constrained De Novo Sequencing of neo-Epitope Peptides Using Tandem Mass Spectrometry. - Sujun Li; Alex DeCourcy; Haixu Tang (RECOMB, 2018)

Computational identification of micro-structural variations and their proteogenomic consequences in cancer. - Yen-Yi Lin; Alexander Gawronski; Faraz Hach; Sujun Li; Ibrahim Numanagic; Iman Sarrafi; Swati Mishra 006; Andrew W. McPherson; Colin C. Collins; Milan Radovich; Haixu Tang; Süleyman Cenk Sahinalp (Bioinform., 2018)

Understanding Membership Inferences on Well-Generalized Learning Models. - Yunhui Long; Vincent Bindschaedler; Lei Wang; Diyue Bu; Xiaofeng Wang 006; Haixu Tang; Carl A. Gunter; Kai Chen 012 (CoRR, 2018)

A Secure Alignment Algorithm for Mapping Short Reads to Human Genome. - Yongan Zhao; Xiaofeng Wang 006; Haixu Tang (J. Comput. Biol., 2018)

MBeacon: Privacy-Preserving Beacons for DNA Methylation Data. - Inken Hagestedt; Yang Zhang 016; Mathias Humbert; Pascal Berrang; Haixu Tang; XiaoFeng Wang 001; Michael Backes 001 (NDSS, 2019)

Session Introduction. - Gamze Gürsoy; Arif Ozgun Harmanci; Haixu Tang; Erman Ayday; Steven E. Brenner (PSB, 2019)

Toward Scalable Fully Homomorphic Encryption Through Light Trusted Computing Assistance. - Wenhao Wang 001; Yichen Jiang; Qintao Shen; Weihao Huang; Hao Chen 030; Shuang Wang 002; Xiaofeng Wang 006; Haixu Tang; Kai Chen 012; Kristin E. Lauter; Dongdai Lin (CoRR, 2019)

Algorithmic approaches to clonal reconstruction in heterogeneous cell populations. - Wazim Mohammed Ismail; Etienne Nzabarushimana; Haixu Tang (Quant. Biol., 2019)

GenoPri'17: International Workshop on Genome Privacy and Security. - Erman Ayday; Muhammad Naveed 001; Haixu Tang (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

A Pragmatic Approach to Membership Inferences on Machine Learning Models. - Yunhui Long; Lei Wang; Diyue Bu; Vincent Bindschaedler; XiaoFeng Wang 001; Haixu Tang; Carl A. Gunter; Kai Chen 012 (EuroS&P, 2020)

Learning Structural Genetic Information via Graph Neural Embedding. - Yuan Xie 005; Yulong Pei; Yun Lu; Haixu Tang; Yuan Zhou 007 (ISBRA, 2020)

Navigating Ethical Quandaries with the Privacy Dilemma of Biomedical Datasets. - Gamze Gürsoy; Megan Doerr; John Wilbanks; Jennifer K. Wagner; Haixu Tang; Steven E. Brenner (PSB, 2020)

Overlap detection on long, error-prone sequencing reads via smooth q-gram. - Yan Song; Haixu Tang; Haoyu Zhang; Qin Zhang 001 (Bioinform., 2020)

Privacy-preserving construction of generalized linear mixed model for biomedical computation. - Rui Zhu; Chao Jiang 002; Xiaofeng Wang 006; Shuang Wang 002; Hao Zheng; Haixu Tang (Bioinform., 2020)

Bounding The Number of Linear Regions in Local Area for Neural Networks with ReLU Activations. - Rui Zhu; Bo Lin; Haixu Tang (CoRR, 2020)

Confidential Attestation: Efficient in-Enclave Verification of Privacy Policy Compliance. - Weijie Liu 004; Wenhao Wang 001; XiaoFeng Wang 001; Xiaozhu Meng; Yaosong Lu; Hongbo Chen; Xinyu Wang; Qingtao Shen; Kai Chen 012; Haixu Tang; Yi Chen 024; Luyi Xing (CoRR, 2020)

HySec-Flow: Privacy-Preserving Genomic Computing with SGX-based Big-Data Analytics Framework. - Chathura Widanage; Weijie Liu 004; Jiayu Li; Hongbo Chen; XiaoFeng Wang 001; Haixu Tang; Judy Fox (CLOUD, 2021)

Practical and Efficient in-Enclave Verification of Privacy Compliance. - Weijie Liu 004; Wenhao Wang 001; Hongbo Chen; Xiaofeng Wang 006; Yaosong Lu; Kai Chen 012; Xinyu Wang; Qintao Shen; Yi Chen 024; Haixu Tang (DSN, 2021)

Bookworm Game: Automatic Discovery of LTE Vulnerabilities Through Documentation Analysis. - Yi Chen 024; Yepeng Yao; XiaoFeng Wang 001; Dandan Xu; Chang Yue; Xiaozhong Liu; Kai Chen 012; Haixu Tang; Baoxu Liu (SP, 2021)

Demon in the Variant: Statistical Analysis of DNNs for Robust Backdoor Contamination Detection. - Di Tang 001; XiaoFeng Wang 001; Haixu Tang; Kehuan Zhang (USENIX Security Symposium, 2021)

Towards Fair Cross-Domain Adaptation via Generative Learning. - Tongxin Wang; Zhengming Ding; Wei Shao 005; Haixu Tang; Kun Huang 001 (WACV, 2021)

Haplotype-based membership inference from summary genomic data. - Diyue Bu; XiaoFeng Wang 001; Haixu Tang (Bioinform., 2021)

Understanding TEE Containers, Easy to Use? Hard to Trust. - Weijie Liu 004; Hongbo Chen; XiaoFeng Wang 001; Zhi Li 048; Danfeng Zhang; Wenhao Wang 001; Haixu Tang (CoRR, 2021)

Seeing the Forest for the Trees: Understanding Security Hazards in the 3GPP Ecosystem through Intelligent Analysis on Change Requests. - Yi Chen 024; Di Tang 001; Yepeng Yao; Mingming Zha 001; XiaoFeng Wang 001; Xiaozhong Liu; Haixu Tang; Dongfang Zhao 010 (USENIX Security Symposium, 2022)

Understanding Impacts of Task Similarity on Backdoor Attack and Detection. - Di Tang 001; Rui Zhu; XiaoFeng Wang 001; Haixu Tang; Yi Chen 024 (CoRR, 2022)

The evolving privacy and security concerns for genomic data analysis and sharing as observed from the iDASH competition. - Tsung-Ting Kuo; Xiaoqian Jiang; Haixu Tang; XiaoFeng Wang 001; Arif Ozgun Harmanci; Miran Kim; Kai W. Post; Diyue Bu; Tyler Bath; Jihoon Kim 001; Weijie Liu 004; Hongbo Chen; et al. (J. Am. Medical Informatics Assoc., 2022)

Locality-Sensitive Hashing-Based k-Mer Clustering for Identification of Differential Microbial Markers Related to Host Phenotype. - Wontack Han; Haixu Tang; Yuzhen Ye (J. Comput. Biol., 2022)

STINMatch: Semi-Supervised Semantic-Topological Iteration Network for Financial Risk Detection via News Label Diffusion. - Xurui Li; Yue Qin; Rui Zhu; Tianqianjin Lin; Yongming Fan; Yangyang Kang; Kaisong Song; Fubang Zhao; Changlong Sun; Haixu Tang; Xiaozhong Liu (EMNLP, 2023)

Selective Amnesia: On Efficient, High-Fidelity and Blind Suppression of Backdoor Effects in Trojaned Machine Learning Models. - Rui Zhu; Di Tang 001; Siyuan Tang; Xiaofeng Wang 006; Haixu Tang (SP, 2023)

Sherlock on Specs: Building LTE Conformance Tests through Automated Reasoning. - Yi Chen 024; Di Tang 001; Yepeng Yao; Mingming Zha 001; XiaoFeng Wang 001; Xiaozhong Liu; Haixu Tang; Baoxu Liu (USENIX Security Symposium, 2023)

Gradient Shaping: Enhancing Backdoor Attack Against Reverse Engineering. - Rui Zhu; Di Tang 001; Siyuan Tang; Guanhong Tao 001; Shiqing Ma; XiaoFeng Wang 001; Haixu Tang (CoRR, 2023)

Large Language Model Soft Ideologization via AI-Self-Consciousness. - Xiaotian Zhou; Qian Wang; Xiaofeng Wang; Haixu Tang; Xiaozhong Liu (CoRR, 2023)

The Janus Interface: How Fine-Tuning in Large Language Models Amplifies the Privacy Risks. - Xiaoyi Chen; Siyuan Tang; Rui Zhu; Shijun Yan; Lei Jin; Zihao Wang; Liya Su; XiaoFeng Wang 001; Haixu Tang (CoRR, 2023)

Preface: RECOMB 2023 Special Issue. - Haixu Tang (J. Comput. Biol., 2023)

The Janus Interface: How Fine-Tuning in Large Language Models Amplifies the Privacy Risks. - Xiaoyi Chen; Siyuan Tang; Rui Zhu; Shijun Yan; Lei Jin; Zihao Wang; Liya Su; Zhikun Zhang 001; Xiaofeng Wang 006; Haixu Tang (CCS, 2024)

FairFix: Enhancing Fairness of Pre-Trained Deep Neural Networks with Scarce Data Resources. - Zhixin Li 003; Rui Zhu; Zihao Wang; Jiale Li; Kaiyuan Liu; Yue Qin; Yongming Fan; Mingyu Gu; Zhihui Lu 002; Jie Wu 003; Hongfeng Chai; Xiaofeng Wang 001; et al. (IDS, 2024)

Gradient Shaping: Enhancing Backdoor Attack Against Reverse Engineering. - Rui Zhu; Di Tang 001; Siyuan Tang; Zihao Wang; Guanhong Tao 001; Shiqing Ma; XiaoFeng Wang 001; Haixu Tang (NDSS, 2024)

Protein Domain Embeddings for Fast and Accurate Similarity Search. - Benjamin Giovanni Iovino; Haixu Tang; Yuzhen Ye (RECOMB, 2024)

DPAdapter: Improving Differentially Private Deep Learning through Noise Tolerance Pre-training. - Zihao Wang; Rui Zhu; Dongruo Zhou; Zhikun Zhang 001; John Mitchell; Haixu Tang; XiaoFeng Wang 001 (USENIX Security Symposium, 2024)

Racing on the Negative Force: Efficient Vulnerability Root-Cause Analysis through Reinforcement Learning on Counterexamples. - Dandan Xu; Di Tang 001; Yi Chen 024; XiaoFeng Wang 001; Kai Chen 012; Haixu Tang; Longxing Li (USENIX Security Symposium, 2024)

SpecEncoder: deep metric learning for accurate peptide identification in proteomics. - Kaiyuan Liu; Chenghua Tao; Yuzhen Ye; Haixu Tang (Bioinform., 2024)

LLM-Enhanced Software Patch Localization. - Jinhong Yu; Yi Chen 024; Di Tang 001; Xiaozhong Liu; XiaoFeng Wang 001; Chen Wu; Haixu Tang (CoRR, 2024)

Rigging the Foundation: Manipulating Pre-training for Advanced Membership Inference Attacks. - Zihao Wang; Rui Zhu; Zhikun Zhang 001; Haixu Tang; Xiaofeng Wang 001 (SP, 2025)

Designing a large language model for chemists. - Xiaoyi Chen; Haixu Tang (Patterns, 2025)

ByzSFL: Achieving Byzantine-Robust Secure Federated Learning with Zero-Knowledge Proofs. - Yongming Fan; Rui Zhu; Zihao Wang; Chenghong Wang; Haixu Tang; Ye Dong; Hyunghoon Cho; Lucila Ohno-Machado (CoRR, 2025)

Enhancing Patient-Centric Communication: Leveraging LLMs to Simulate Patient Perspectives. - Xinyao Ma; Rui Zhu; Zihao Wang; Jingwei Xiong; Qingyu Chen 001; Haixu Tang; L. Jean Camp; Lucila Ohno-Machado (CoRR, 2025)

Strategic priorities for transformative progress in advancing biology with proteomics and artificial intelligence. - Yingying Sun; Jun A; Zhiwei Liu; Rui Sun; Liujia Qian; Samuel H. Payne; Wout Bittremieux; Markus Ralser; Chen Li 021; Yi Chen; Zhen Dong; Yasset Pérez-Riverol; et al. (CoRR, 2025)

Hey, That's My Data! Label-Only Dataset Inference in Large Language Models. - Chen Xiong; Zihao Wang; Rui Zhu; Tsung-Yi Ho; Pin-Yu Chen; Jingwei Xiong; Haixu Tang; Lucila Ohno-Machado (CoRR, 2025)