Enhanced Blood Vessels in Laparoscopy by Using Narrow-Band Imaging. - Hamed Akbari; Yukio Kosugi; Kazuyuki Kojima; Toshiaki Ohya; Hideki Akamatsu; Naofumi Tanaka (MVA, 2007)

Wavelet-Based Compression and Segmentation of Hyperspectral Images in Surgery. - Hamed Akbari; Yukio Kosugi; Kazuyuki Kojima; Naofumi Tanaka (MIAR, 2008)

Segmentation of Arteries in Minimally Invasive Surgery Using Change Detection. - Hamed Akbari; Yukio Kosugi; Kazuyuki Kojima (IEICE Trans. Inf. Syst., 2009)

Hyperspectral Image segmentation and its application in abdominal surgery. - Hamed Akbari; Yukio Kosugi; Kazuyuki Kojima; Naofumi Tanaka (Int. J. Funct. Informatics Pers. Medicine, 2009)

Detection and Analysis of the Intestinal Ischemia Using Visible and Invisible Hyperspectral Imaging. - Hamed Akbari; Yukio Kosugi; Kazuyuki Kojima; Naofumi Tanaka (IEEE Trans. Biomed. Eng., 2010)

A PET/CT Directed, 3D Ultrasound-Guided Biopsy System for Prostate Cancer. - Baowei Fei; Viraj Master; Peter Nieh; Hamed Akbari; Xiaofeng Yang 005; Aaron Fenster; David M. Schuster (Prostate Cancer Imaging, 2011)

3D non-rigid registration using surface and local salient features for transrectal ultrasound image-guided prostate biopsy. - Xiaofeng Yang 005; Hamed Akbari; Luma V. Halig; Baowei Fei (Image-Guided Procedures, 2011)

3D segmentation of prostate ultrasound images using wavelet transform. - Hamed Akbari; Xiaofeng Yang 005; Luma V. Halig; Baowei Fei (Image Processing, 2011)

Hyperspectral imaging and spectral-spatial classification for cancer detection. - Baowei Fei; Hamed Akbari; Luma V. Halig (BMEI, 2012)

A molecular image-directed, 3D ultrasound-guided biopsy system for the prostate. - Baowei Fei; David M. Schuster; Viraj Master; Hamed Akbari; Aaron Fenster; Peter Nieh (Image-Guided Procedures, 2012)

Automatic 3D segmentation of the kidney in MR images using wavelet feature extraction and probability shape model. - Hamed Akbari; Baowei Fei (Image Processing, 2012)

Combining Generative Models for Multifocal Glioma Segmentation and Registration. - Dongjin Kwon; Russell T. Shinohara; Hamed Akbari; Christos Davatzikos (MICCAI (1), 2014)

PORTR: Pre-Operative and Post-Recurrence Brain Tumor Registration. - Dongjin Kwon; Marc Niethammer; Hamed Akbari; Michel Bilello; Christos Davatzikos; Kilian M. Pohl (IEEE Trans. Medical Imaging, 2014)

Comparative Evaluation of Registration Algorithms in Different Brain Databases With Varying Difficulty: Results and Insights. - Yangming Ou; Hamed Akbari; Michel Bilello; Xiao Da; Christos Davatzikos (IEEE Trans. Medical Imaging, 2014)

GLISTRboost: Combining Multimodal MRI Segmentation, Registration, and Biophysical Tumor Growth Modeling with Gradient Boosting Machines for Glioma Segmentation. - Spyridon Bakas; Ke Zeng; Aristeidis Sotiras; Saima Rathore; Hamed Akbari; Bilwaj Gaonkar; Martin Rozycki; Sarthak Pati; Christos Davatzikos (Brainles@MICCAI, 2015)

Segmentation of Gliomas in Pre-operative and Post-operative Multimodal Magnetic Resonance Imaging Volumes Based on a Hybrid Generative-Discriminative Framework. - Ke Zeng; Spyridon Bakas; Aristeidis Sotiras; Hamed Akbari; Martin Rozycki; Saima Rathore; Sarthak Pati; Christos Davatzikos (BrainLes@MICCAI, 2016)

Brain Cancer Imaging Phenomics Toolkit (brain-CaPTk): An Interactive Platform for Quantitative Analysis of Glioblastoma. - Saima Rathore; Spyridon Bakas; Sarthak Pati; Hamed Akbari; Ratheesh Kalarot; Patmaa Sridharan; Martin Rozycki; Mark Bergman; Birkan Tunç; Ragini Verma; Michel Bilello; Christos Davatzikos (BrainLes@MICCAI, 2017)

Deriving stable multi-parametric MRI radiomic signatures in the presence of inter-scanner variations: survival prediction of glioblastoma via imaging pattern analysis and machine learning techniques. - Saima Rathore; Spyridon Bakas; Hamed Akbari; Gaurav Shukla; Martin Rozycki; Christos Davatzikos (Computer-Aided Diagnosis, 2018)

Patient-Specific Registration of Pre-operative and Post-recurrence Brain Tumor MRI Scans. - Xu Han 009; Spyridon Bakas; Roland Kwitt; Stephen R. Aylward; Hamed Akbari; Michel Bilello; Christos Davatzikos; Marc Niethammer (BrainLes@MICCAI (1), 2018)

Technical note: a radiomic signature of infiltration in peritumoral edema predicts subsequent recurrence in glioblastoma. - Saima Rathore; Hamed Akbari; Jimit Doshi; Gaurav Shukla; Martin Rozycki; Michel Bilello; Robert Lustig; Christos Davatzikos (Image-Guided Procedures, 2018)

Towards Population-Based Histologic Stain Normalization of Glioblastoma. - Caleb M. Grenko; Angela N. Viaene; MacLean P. Nasrallah; Michael D. Feldman; Hamed Akbari; Spyridon Bakas (BrainLes@MICCAI (1), 2019)

The Cancer Imaging Phenomics Toolkit (CaPTk): Technical Overview. - Sarthak Pati; Ashish Singh; Saima Rathore; Aimilia Gastounioti; Mark Bergman; Phuc Ngo; Sung Min Ha; Dimitrios Bounias; James Minock; Grayson Murphy; Hongming Li; Amit Bhattarai; et al. (BrainLes@MICCAI (2), 2019)

Non-invasive transcriptomic classification of de novo Glioblastoma patients through multivariate quantitative analysis of baseline preoperative multimodal magnetic resonance imaging. - Saima Rathore; Hamed Akbari; Spyridon Bakas; Jared Pisapia; Xiao Da; Donald M. O'Rourke; Christos Davatzikos (Computer-Aided Diagnosis, 2019)

Multivariate Analysis of Preoperative Magnetic Resonance Imaging Reveals Transcriptomic Classification of de novo Glioblastoma Patients. - Saima Rathore; Hamed Akbari; Spyridon Bakas; Jared Pisapia; Gaurav Shukla; Jeffrey D. Rudie; Xiao Da; Ramana V. Davuluri; Nadia Dahmane; Donald M. O'Rourke; Christos Davatzikos (Frontiers Comput. Neurosci., 2019)

Estimating Glioblastoma Biophysical Growth Parameters Using Deep Learning Regression. - Sarthak Pati; Vaibhav Sharma; Heena Aslam; Siddhesh P. Thakur; Hamed Akbari; Andreas Mang; Shashank Subramanian; George Biros; Christos Davatzikos; Spyridon Bakas (BrainLes@MICCAI (1), 2020)

A Deep Network for Joint Registration and Reconstruction of Images with Pathologies. - Xu Han 009; Zhengyang Shen; Zhenlin Xu; Spyridon Bakas; Hamed Akbari; Michel Bilello; Christos Davatzikos; Marc Niethammer (MLMI@MICCAI, 2020)

Integrative radiomic analysis for pre-surgical prognostic stratification of glioblastoma patients: from advanced to basic MRI protocols. - Spyridon Bakas; Gaurav Shukla; Hamed Akbari; Güray Erus; Aristeidis Sotiras; Saima Rathore; Chiharu Sako; Sung Min Ha; Martin Rozycki; Ashish Singh; Russell T. Shinohara; Michel Bilello; et al. (Image-Guided Procedures, 2020)

The Brain Tumor Sequence Registration Challenge: Establishing Correspondence between Pre-Operative and Follow-up MRI scans of diffuse glioma patients. - Bhakti Baheti; Diana Waldmannstetter; Satrajit Chakrabarty; Hamed Akbari; Michel Bilello; Benedikt Wiestler; Julian Schwarting; Evan Calabrese; Jeffrey D. Rudie; Syed Amaan Abidi; Mina Mousa; Javier E. Villanueva-Meyer; et al. (CoRR, 2021)

Artificial intelligence-based locoregional markers of brain peritumoral microenvironment. - Zahra Riahi Samani; Drew Parker; Hamed Akbari; Spyridon Bakas; Ronald L. Wolf; Steven Brem; Ragini Verma (CoRR, 2022)

Brain Tumor Sequence Registration (BraTS-Reg) Challenge Dataset. - Bhakti Baheti; Satrajit Chakrabarty; Hamed Akbari; Michel Bilello; Benedikt Wiestler; Julian Schwarting; Evan Calabrese; Jeffrey D. Rudie; Syed Amaan Abidi; Mina Mousa; Javier E. Villanueva-Meyer; Brandon K. K. Fields; et al. (Zenodo, 2025)