Ranking Genes for Discriminability on Microarray Data. - Han-Yu Chuang; Huai-Kuang Tsai; Yuan-Fan Tsai; Cheng-Yan Kao (J. Inf. Sci. Eng., 2003)

Automatically Predicting Possible Loci of Variable Number of Tandem Repeats. - Chia-Hung Chang; Han-Yu Chuang; Yi-Hung Chiang; Chien-Shun Chiou; Hsueh-I Lu; Cheng-Yan Kao (BIBE, 2004)

Identifying Significant Genes from Microarray Data. - Han-Yu Chuang; Hongfang Liu; Stuart M. Brown; Cameron McMunn-Coffran; Cheng-Yan Kao; D. Frank Hsu (BIBE, 2004)

Combination Methods in Microarray Analysis. - Han-Yu Chuang; Hongfang Liu; Fang-An Chen; Cheng-Yan Kao; D. Frank Hsu (ISPAN, 2004)

Optimal Designs for Microarray Experiments. - Han-Yu Chuang; Huai-Kuang Tsai; Cheng-Yan Kao (ISPAN, 2004)

Discovering Statistically Significant Clusters by Using Iterative Genetic Algorithms in Gene Expression Data. - Hua-Sheng Chiu; Han-Yu Chuang; Huai-Kuang Tsai; Tao-Wei Huang; Cheng-Yan Kao (METMBS, 2004)

Designing Multiple-Use Primer Set for Multiplex PCR by Using Compact GAs. - Yu-Cheng Huang; Han-Yu Chuang; Huai-Kuang Tsai; Chun-Fan Chang; Cheng-Yan Kao (PPSN, 2004)

Inferring Pathway Activity toward Precise Disease Classification. - Eunjung Lee; Han-Yu Chuang; Jong-Won Kim 001; Trey Ideker; Doheon Lee (PLoS Comput. Biol., 2008)

Isaac: ultra-fast whole-genome secondary analysis on Illumina sequencing platforms. - Come Raczy; Roman Petrovski; Christopher T. Saunders; Ilya Chorny; Semyon Kruglyak; Elliott H. Margulies; Han-Yu Chuang; Morten Källberg; Swathi A. Kumar; Arnold Liao; Kristina M. Little; Michael P. Strömberg; et al. (Bioinform., 2013)

Pisces: an accurate and versatile variant caller for somatic and germline next-generation sequencing data. - Tamsen Dunn; Gwenn Berry; Dorothea Emig-Agius; Yu Jiang; Serena Lei; Anita Iyer; Nitin Udar; Han-Yu Chuang; Jeff Hegarty; Michael Dickover; Brandy Klotzle; Justin Robbins; et al. (Bioinform., 2019)