Human-centered attention models for video summarization. - Kaiming Li; Lei Guo 002; Carlos Faraco; Dajiang Zhu; Fan Deng 001; Tuo Zhang; Xi Jiang 001; Degang Zhang; Hanbo Chen; Xintao Hu; L. Stephen Miller; Tianming Liu 001 (ICMI-MLMI, 2010)

A Dynamic Skull Model for Simulation of Cerebral Cortex Folding. - Hanbo Chen; Lei Guo 002; Jingxin Nie; Tuo Zhang; Xintao Hu; Tianming Liu 001 (MICCAI (2), 2010)

Bridging low-level features and high-level semantics via fMRI brain imaging for video classification. - Xintao Hu; Fan Deng 001; Kaiming Li; Tuo Zhang; Hanbo Chen; Xi Jiang 001; Jinglei Lv; Dajiang Zhu; Carlos Faraco; Degang Zhang; Arsham Mesbah; Junwei Han 001; et al. (ACM Multimedia, 2010)

Individualized ROI Optimization via Maximization of Group-wise Consistency of Structural and Functional Profiles. - Kaiming Li; Lei Guo 002; Carlos Faraco; Dajiang Zhu; Fan Deng 001; Tuo Zhang; Xi Jiang 001; Degang Zhang; Hanbo Chen; Xintao Hu; L. Stephen Miller; Tianming Liu 001 (NIPS, 2010)

Discovering Dense and Consistent Landmarks in the Brain. - Dajiang Zhu; Degang Zhang; Carlos Faraco; Kaiming Li; Fan Deng 001; Hanbo Chen; Xi Jiang 001; Lei Guo 002; L. Stephen Miller; Tianming Liu 001 (IPMI, 2011)

Fine granularity parcellation of gyrus via fiber shape and connectivity based features. - Dajiang Zhu; Kaiming Li; Fan Deng 001; Degang Zhang; Xi Jiang 001; Hanbo Chen; Lei Guo 002; L. Stephen Miller; Tianming Liu 001 (ISBI, 2011)

Optimization of functional brain ROIs via maximization of consistency of structural connectivity profiles. - Dajiang Zhu; Kaiming Li; Carlos Faraco; Fan Deng 001; Degang Zhang; Xi Jiang 001; Hanbo Chen; Lei Guo 002; L. Stephen Miller; Tianming Liu 001 (ISBI, 2011)

Assessing Regularity and Variability of Cortical Folding Patterns of Working Memory ROIs. - Hanbo Chen; Tuo Zhang; Kaiming Li; Xintao Hu; Lei Guo 002; Tianming Liu 001 (MICCAI (2), 2011)

Identification of Cortical Landmarks Based on Consistent Connectivity to Subcortical Structures. - Degang Zhang; Lei Guo 002; Dajiang Zhu; Tuo Zhang; Xintao Hu; Kaiming Li; Xi Jiang 001; Hanbo Chen; Jinglei Lv; Fan Deng 001; Qun Zhao (MBIA, 2011)

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R. - Hanbo Chen; Paul C. Boutros (BMC Bioinform., 2011)

Identification of cortical landmarks based on structural connectivity to subcortical regions. - Degang Zhang; Lei Guo 002; Xintao Hu; Kaiming Li; Dajiang Zhu; Xi Jiang 001; Hanbo Chen; Fan Deng 001; Qun Zhao; Tianming Liu 001 (Int. J. Comput. Biol. Drug Des., 2011)

Group-Wise Consistent Parcellation of Gyri via Adaptive Multi-view Spectral Clustering of Fiber Shapes. - Hanbo Chen; Xiao Cai; Dajiang Zhu; Feiping Nie 001; Tianming Liu 001; Heng Huang (MICCAI (2), 2012)

Inferring Group-Wise Consistent Multimodal Brain Networks via Multi-view Spectral Clustering. - Hanbo Chen; Kaiming Li; Dajiang Zhu; Tuo Zhang; Changfeng Jin; Lei Guo 002; Lingjiang Li; Tianming Liu 001 (MICCAI (3), 2012)

Constructing Fiber Atlases for Functional ROIs via fMRI-Guided DTI Image Registration. - Tuo Zhang; Lei Guo 002; Hanbo Chen; Xintao Hu; Kaiming Li; Tianming Liu 001 (MBIA, 2012)

Visual analytics of brain networks. - Kaiming Li; Lei Guo 002; Carlos Faraco; Dajiang Zhu; Hanbo Chen; Yixuan Yuan; Jinglei Lv; Fan Deng 001; Xi Jiang 001; Tuo Zhang; Xintao Hu; Degang Zhang; et al. (NeuroImage, 2012)

Exploring High-Order Functional Interactions via Structurally-Weighted LASSO Models. - Dajiang Zhu; Xiang Li 001; Xi Jiang 001; Hanbo Chen; Dinggang Shen; Tianming Liu 001 (IPMI, 2013)

Assessing regularity and variability of cortical folding patterns of dicccols. - Jia Chen; Jianfeng Lu 003; Hanbo Chen; Dajiang Zhu; Tianming Liu 001 (ISBI, 2013)

Identifying consistent brain networks via maximizing predictability of functional connectome from structural connectome. - Hanbo Chen; Kaiming Li; Dajiang Zhu; Tianming Liu 001 (ISBI, 2013)

Identifying functional connectomics abnormality in attention deficit hyperactivity disorder. - Peng Wang; Dajiang Zhu; Xiang Li 001; Hanbo Chen; Xi Jiang 001; Li Sun; Qingjiu Cao; Li An; Tianming Liu 001; Yufeng Wang (ISBI, 2013)

Joint analysis of gyral folding and fiber shape patterns. - Xiang Yu 003; Hanbo Chen; Tuo Zhang; Xintao Hu; Lei Guo 002; Tianming Liu 001 (ISBI, 2013)

Identifying Group-Wise Consistent White Matter Landmarks via Novel Fiber Shape Descriptor. - Hanbo Chen; Tuo Zhang; Tianming Liu 001 (MICCAI (1), 2013)

Sparse Representation of Higher-Order Functional Interaction Patterns in Task-Based FMRI Data. - Shu Zhang 001; Xiang Li 001; Jinglei Lv; Xi Jiang 001; Dajiang Zhu; Hanbo Chen; Tuo Zhang; Lei Guo 002; Tianming Liu 001 (MICCAI (3), 2013)

Characterization of task-free and task-performance brain states via functional connectome patterns. - Xin Zhang 013; Lei Guo 002; Xiang Li 001; Tuo Zhang; Dajiang Zhu; Kaiming Li; Hanbo Chen; Jinglei Lv; Changfeng Jin; Qun Zhao; Lingjiang Li; Tianming Liu 001 (Medical Image Anal., 2013)

Meta-Analysis of Functional Roles of DICCCOLs. - Yixuan Yuan; Xi Jiang 001; Dajiang Zhu; Hanbo Chen; Kaiming Li; Peili Lv; Xiang Yu 003; Xiaojin Li; Shu Zhang 001; Tuo Zhang; Xintao Hu; Junwei Han 001; et al. (Neuroinformatics, 2013)

Inferring Group-Wise Consistent Multimodal Brain Networks via Multi-View Spectral Clustering. - Hanbo Chen; Kaiming Li; Dajiang Zhu; Xi Jiang 001; Yixuan Yuan; Peili Lv; Tuo Zhang; Lei Guo 002; Dinggang Shen; Tianming Liu 001 (IEEE Trans. Medical Imaging, 2013)

Group-wise optimization and individualized prediction of structural connectomes. - Hanbo Chen; Kaiming Li; Dajiang Zhu; Lei Guo 002; Xi Jiang 001; Tianming Liu 001 (ISBI, 2014)

Evolutionarily-preserved consistent gyral folding patterns across primate brains. - Hanbo Chen; Xiang Yu 003; Xi Jiang 001; Kaiming Li; Longchuan Li; Xintao Hu; Junwei Han 001; Lei Guo 002; Xiaoping Hu 001; Tianming Liu 001 (ISBI, 2014)

Construct and Assess Multimodal Mouse Brain Connectomes via Joint Modeling of Multi-scale DTI and Neuron Tracer Data. - Hanbo Chen; Yu Zhao 007; Tuo Zhang; Hongmiao Zhang; Hui Kuang; Meng Li; Joe Z. Tsien; Tianming Liu 001 (MICCAI (3), 2014)

Group-Wise Optimization of Common Brain Landmarks with Joint Structural and Functional Regulations. - Dajiang Zhu; Jinglei Lv; Hanbo Chen; Tianming Liu 001 (MICCAI (2), 2014)

Characterization of U-shape streamline fibers: Methods and applications. - Tuo Zhang; Hanbo Chen; Lei Guo 002; Kaiming Li; Longchuan Li; Shu Zhang 001; Dinggang Shen; Xiaoping Hu 001; Tianming Liu 001 (Medical Image Anal., 2014)

Fusing DTI and fMRI data: A survey of methods and applications. - Dajiang Zhu; Tuo Zhang; Xi Jiang 001; Xintao Hu; Hanbo Chen; Ning Yang 003; Jinglei Lv; Junwei Han 001; Lei Guo 002; Tianming Liu 001 (NeuroImage, 2014)

Multiscale and multimodal fusion of tract-tracing and DTI-derived fibers in macaque brains. - Ke Jing; Tuo Zhang; Jianfeng Lu 003; Hanbo Chen; Xi Jiang 001; Lei Guo 002; Longchuan Li; Xiaoping Hu 001; Jinglei Lv; Bao Ge; Tianming Liu 001 (ISBI, 2015)

Group-wise consistent sulcal fundi segmentation based on DMRI-derived ODF features. - Tuo Zhang; Hanbo Chen; Xi Jiang 001; Bao Ge; Lei Guo 002; Tianming Liu 001 (ISBI, 2015)

Longitudinal Analysis of Brain Recovery after Mild Traumatic Brain Injury Based on Groupwise Consistent Brain Network Clusters. - Hanbo Chen; Armin Iraji; Xi Jiang 001; Jinglei Lv; Zhifeng Kou; Tianming Liu 001 (MICCAI (2), 2015)

Distance Networks for Morphological Profiling and Characterization of DICCCOL Landmarks. - Yue Yuan; Hanbo Chen; Jianfeng Lu 003; Tuo Zhang; Tianming Liu 001 (MICCAI (2), 2015)

Multi-scale and Multimodal Fusion of Tract-Tracing, Myelin Stain and DTI-derived Fibers in Macaque Brains. - Tuo Zhang; Jun Kong; Ke Jing; Hanbo Chen; Xi Jiang 001; Longchuan Li; Lei Guo 002; Jianfeng Lu 003; Xiaoping Hu 001; Tianming Liu 001 (MICCAI (2), 2015)

SmartTracing: self-learning-based Neuron reconstruction. - Hanbo Chen; Hang Xiao; Tianming Liu 001; Hanchuan Peng (Brain Informatics, 2015)

Sparse representation of whole-brain fMRI signals for identification of functional networks. - Jinglei Lv; Xi Jiang 001; Xiang Li 001; Dajiang Zhu; Hanbo Chen; Tuo Zhang; Shu Zhang 001; Xintao Hu; Junwei Han 001; Heng Huang; Jing Zhang 010; Lei Guo 002; et al. (Medical Image Anal., 2015)

Optimization of large-scale mouse brain connectome via joint evaluation of DTI and neuron tracing data. - Hanbo Chen; Tao Liu 044; Yu Zhao 007; Tuo Zhang; Yujie Li 004; Meng Li; Hongmiao Zhang; Hui Kuang; Lei Guo 002; Joe Z. Tsien; Tianming Liu 001 (NeuroImage, 2015)

Anatomy-Guided Dense Individualized and Common Connectivity-Based Cortical Landmarks (A-DICCCOL). - Xi Jiang 001; Tuo Zhang; Dajiang Zhu; Kaiming Li; Hanbo Chen; Jinglei Lv; Xintao Hu; Junwei Han 001; Dinggang Shen; Lei Guo 002; Tianming Liu 001 (IEEE Trans. Biomed. Eng., 2015)

Holistic Atlases of Functional Networks and Interactions Reveal Reciprocal Organizational Architecture of Cortical Function. - Jinglei Lv; Xi Jiang 001; Xiang Li 001; Dajiang Zhu; Shu Zhang 001; Shijie Zhao 001; Hanbo Chen; Tuo Zhang; Xintao Hu; Junwei Han 001; Jieping Ye; Lei Guo 002; et al. (IEEE Trans. Biomed. Eng., 2015)

Group-wise sparse representation of brain states reveal network abnormalities in mild traumatic brain injury. - Jinglei Lv; Armin Iraji; Hanbo Chen; Fangfei Ge; Lei Guo 002; Xin Zhang 013; Zhifeng Kou; Tianming Liu 001 (ISBI, 2016)

Discover Mouse Gene Coexpression Landscape Using Dictionary Learning and Sparse Coding. - Yujie Li 004; Hanbo Chen; Xi Jiang 001; Xiang Li 001; Jinglei Lv; Hanchuan Peng; Joe Z. Tsien; Tianming Liu 001 (MICCAI (1), 2016)

Inter-subject fMRI registration based on functional networks. - Hanbo Chen; Yu Zhao 007; Yujie Li 004; Jinglei Lv; Tianming Liu 001 (ISBI, 2017)

3-D functional brain network classification using Convolutional Neural Networks. - Dehua Ren; Yu Zhao 007; Hanbo Chen; Qinglin Dong; Jinglei Lv; Tianming Liu 001 (ISBI, 2017)

A novel framework for groupwise registration of fMRI images based on common functional networks. - Yu Zhao 007; Shu Zhang 001; Hanbo Chen; Wei Zhang 090; Jinglei Lv; Xi Jiang 001; Dinggang Shen; Tianming Liu 001 (ISBI, 2017)

Fast assembling of neuron fragments in serial 3D sections. - Hanbo Chen; Daniel Maxim Iascone; Nuno Maçarico da Costa; Ed S. Lein; Tianming Liu 001; Hanchuan Peng (Brain Informatics, 2017)

Radial Structure Scaffolds Convolution Patterns of Developing Cerebral Cortex. - Mir Jalil Razavi; Tuo Zhang; Hanbo Chen; Yujie Li 004; Simon Platt; Yu Zhao 007; Lei Guo 002; Xiaoping Hu 001; Xianqiao Wang; Tianming Liu 001 (Frontiers Comput. Neurosci., 2017)

Mechanisms of circumferential gyral convolution in primate brains. - Tuo Zhang; Mir Jalil Razavi; Hanbo Chen; Yujie Li 004; Xiao Li 024; Longchuan Li; Lei Guo 002; Xiaoping Hu 001; Tianming Liu 001; Xianqiao Wang (J. Comput. Neurosci., 2017)

Gyral net: A new representation of cortical folding organization. - Hanbo Chen; Yujie Li 004; Fangfei Ge; Gang Li 001; Dinggang Shen; Tianming Liu 001 (Medical Image Anal., 2017)

Constructing fine-granularity functional brain network atlases via deep convolutional autoencoder. - Yu Zhao 007; Qinglin Dong; Hanbo Chen; Armin Iraji; Yujie Li 004; Milad Makkie; Zhifeng Kou; Tianming Liu 001 (Medical Image Anal., 2017)

Transcriptome Architecture of Adult Mouse Brain Revealed by Sparse Coding of Genome-Wide In Situ Hybridization Images. - Yujie Li 004; Hanbo Chen; Xi Jiang 001; Xiang Li 001; Jinglei Lv; Meng Li; Hanchuan Peng; Joe Z. Tsien; Tianming Liu 001 (Neuroinformatics, 2017)

Train a 3D U-Net to segment cranial vasculature in CTA volume without manual annotation. - Xuhui Chen; Yi Lu 019; Junjie Bai; Youbing Yin; Kunlin Cao; Yuwei Li; Hanbo Chen; Qi Song 001; Jun Wu (ISBI, 2018)

A novel framework for analyzing cortical folding patterns based on sulcal baselines and gyral crestlines. - Fangfei Ge; Hanbo Chen; Tuo Zhang; Xianqiao Wang; Lin Yuan; Xintao Hu; Lei Guo 002; Tianming Liu 001 (ISBI, 2018)

Integrate Domain Knowledge in Training CNN for Ultrasonography Breast Cancer Diagnosis. - Jiali Liu; Wanyu Li; Ningbo Zhao; Kunlin Cao; Youbing Yin; Qi Song 001; Hanbo Chen; Xuehao Gong (MICCAI (2), 2018)

Optimization of macaque brain DMRI connectome by neuron tracing and myelin stain data. - Tuo Zhang; Jun Kong; Ke Jing; Hanbo Chen; Xi Jiang 001; Longchuan Li; Lei Guo 002; Jianfeng Lu 003; Xiaoping Hu 001; Tianming Liu 001 (Comput. Medical Imaging Graph., 2018)

Automatic Recognition of fMRI-Derived Functional Networks Using 3-D Convolutional Neural Networks. - Yu Zhao 007; Qinglin Dong; Shu Zhang 001; Wei Zhang 090; Hanbo Chen; Xi Jiang 001; Lei Guo 002; Xintao Hu; Junwei Han 001; Tianming Liu 001 (IEEE Trans. Biomed. Eng., 2018)

Polyp Tracking in Video Colonoscopy Using Optical Flow With an On-The-Fly Trained CNN. - He Zheng; Hanbo Chen; Junzhou Huang; Xuzhi Li; Xiao Han 011; Jianhua Yao 001 (ISBI, 2019)

Rectified Cross-Entropy and Upper Transition Loss for Weakly Supervised Whole Slide Image Classifier. - Hanbo Chen; Xiao Han 011; Xinjuan Fan; Xiaoying Lou; Hailing Liu; Junzhou Huang; Jianhua Yao 001 (MICCAI (1), 2019)

From Whole Slide Imaging to Microscopy: Deep Microscopy Adaptation Network for Histopathology Cancer Image Classification. - Yifan Zhang 004; Hanbo Chen; Ying Wei 001; Peilin Zhao; Jiezhang Cao; Xinjuan Fan; Xiaoying Lou; Hailing Liu; Jinlong Hou; Xiao Han 011; Jianhua Yao 001; Qingyao Wu; et al. (MICCAI (1), 2019)

Deep Neural Networks for In Situ Hybridization Grid Completion and Clustering. - Yujie Li 004; Heng Huang; Hanbo Chen; Tianming Liu 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Multi-resolution Multi-task Network and Polyp Tracking. - Hanbo Chen (Computer-Aided Analysis of Gastrointestinal Videos, 2021)

From Pixel to Whole Slide: Automatic Detection of Microvascular Invasion in Hepatocellular Carcinoma on Histopathological Image via Cascaded Networks. - Hanbo Chen; Kang Wang; Yuyao Zhu; Jiangpeng Yan; Yan Ji 004; Jingjing Li; Dong Xie; Junzhou Huang; Shuqun Cheng; Jianhua Yao 001 (MICCAI (8), 2021)

Hierarchical Attention Guided Framework for Multi-resolution Collaborative Whole Slide Image Segmentation. - Jiangpeng Yan; Hanbo Chen; Kang Wang; Yan Ji 004; Yuyao Zhu; Jingjing Li; Dong Xie; Zhe Xu 012; Junzhou Huang; Shuqun Cheng; Xiu Li 001; Jianhua Yao 001 (MICCAI (8), 2021)

Board games for quantum computers. - Biao Wu; Hanbo Chen; Zhikang Luo (Sci. China Inf. Sci., 2021)

ConCL: Concept Contrastive Learning for Dense Prediction Pre-training in Pathology Images. - Jiawei Yang 002; Hanbo Chen; Yuan Liang 001; Junzhou Huang; Lei He 001; Jianhua Yao 001 (ECCV (21), 2022)

Towards Better Understanding and Better Generalization of Low-shot Classification in Histology Images with Contrastive Learning. - Jiawei Yang 002; Hanbo Chen; Jiangpeng Yan; Xiaoyu Chen; Jianhua Yao 001 (ICLR, 2022)

ReMix: A General and Efficient Framework for Multiple Instance Learning Based Whole Slide Image Classification. - Jiawei Yang 002; Hanbo Chen; Yu Zhao 009; Fan Yang 081; Yao Zhang 010; Lei He 001; Jianhua Yao 001 (MICCAI (2), 2022)

TreeMoCo: Contrastive Neuron Morphology Representation Learning. - Hanbo Chen; Jiawei Yang 002; Daniel Maxim Iascone; Lijuan Liu; Lei He 001; Hanchuan Peng; Jianhua Yao 001 (NeurIPS, 2022)

Deep contrastive learning based tissue clustering for annotation-free histopathology image analysis. - Jiangpeng Yan; Hanbo Chen; Xiu Li 001; Jianhua Yao 001 (Comput. Medical Imaging Graph., 2022)

Towards better understanding and better generalization of few-shot classification in histology images with contrastive learning. - Jiawei Yang 002; Hanbo Chen; Jiangpeng Yan; Xiaoyu Chen; Jianhua Yao 001 (CoRR, 2022)

Seeking Common Ground While Reserving Differences: Multiple Anatomy Collaborative Framework for Undersampled MRI Reconstruction. - Jiangpeng Yan; ChengHui Yu; Hanbo Chen; Zhe Xu 012; Junzhou Huang; Xiu Li 001; Jianhua Yao 001 (CoRR, 2022)

Human-Machine Interactive Tissue Prototype Learning for Label-Efficient Histopathology Image Segmentation. - Wentao Pan 001; Jiangpeng Yan; Hanbo Chen; Jiawei Yang 002; Zhe Xu 012; Xiu Li 001; Jianhua Yao 001 (IPMI, 2023)

Three-Dimensional Modeling of Marine Controlled Source Electromagnetic Using a New High-Order Finite Element Method With an Absorption Boundary Condition. - Hanbo Chen; Bin Xiong; Yuguo Lu; Qiyun Jiang; Lishan Huang; Shuai Zhou (IEEE Trans. Geosci. Remote. Sens., 2023)

AFS-HCTNet: A stroke segmentation network based on hybrid SCNN-Transformer with adaptive feature selection. - Dongdong Zhao; Jingru Liu; Peng Sun; Bingchen Li; Hanbo Chen (Biomed. Signal Process. Control., 2026)