A Method for Estimating Metabolic Fluxes from Incomplete Isotopomer Information. - Juho Rousu; Ari Rantanen; Hannu Maaheimo; Esa Pitkänen; Katja Saarela; Esko Ukkonen (CMSB, 2003)

Planning optimal measurements of isotopomer distributions for estimation of metabolic fluxes. - Ari Rantanen; Taneli Mielikäinen; Juho Rousu; Hannu Maaheimo; Esko Ukkonen (Bioinform., 2006)

Equivalence of Metabolite Fragments and Flow Analysis of Isotopomer Distributions for Flux Estimation. - Ari Rantanen; Hannu Maaheimo; Esa Pitkänen; Juho Rousu; Esko Ukkonen (Trans. Comp. Sys. Biology, 2006)

An analytic and systematic framework for estimating metabolic flux ratios from 13C tracer experiments. - Ari Rantanen; Juho Rousu; Paula Jouhten; Nicola Zamboni; Hannu Maaheimo; Esko Ukkonen (BMC Bioinform., 2008)

Oxygen dependence of metabolic fluxes and energy generation of Saccharomyces cerevisiae CEN.PK113-1A. - Paula Jouhten; Eija Rintala; Anne Huuskonen; Anu Tamminen; Mervi Toivari; Marilyn Wiebe; Laura Ruohonen; Merja Penttilä; Hannu Maaheimo (BMC Syst. Biol., 2008)

13C-metabolic flux ratio and novel carbon path analyses confirmed that Trichoderma reesei uses primarily the respirative pathway also on the preferred carbon source glucose. - Paula Jouhten; Esa Pitkänen; Tiina Pakula; Markku Saloheimo; Merja Penttilä; Hannu Maaheimo (BMC Syst. Biol., 2009)

A multi-level study of recombinant Pichia pastoris in different oxygen conditions. - Kristin Baumann; Marc Carnicer; Martin Dragosits; Alexandra Graf; Johannes Stadlmann; Paula Jouhten; Hannu Maaheimo; Brigitte Gasser; Joan Albiol; Diethard Mattanovich; Pau Ferrer (BMC Syst. Biol., 2010)