The Steady States and Dynamics of Urokinase-mediated Plasmin Activation. - Lakshmi Venkatraman; Hanry Yu; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Lisa Tucker-Kellogg (Pacific Symposium on Biocomputing, 2010)

Automated Scoring System for Liver Fibrosis Diagnosis with Second Harmonic Generation Microscopy. - Shuoyu Xu; Dean Tai; Peter So; Hanry Yu; Jagath C. Rajapakse (Aust. J. Intell. Inf. Process. Syst., 2010)

Pani: a novel algorithm for fast discovery of putative target nodes in signaling networks. - Huey-Eng Chua; Qing Zhao; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Lisa Tucker-Kellogg; Hanry Yu (BCB, 2011)

Fuse: towards multi-level functional summarization of protein interaction networks. - Boon-Siew Seah; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Hanry Yu (BCB, 2011)

Automated scoring of liver fibrosis through combined features from different collagen groups. - Shuoyu Xu; Dean Tai; Aileen Wee; Roy E. Welsch; Peter So; Hanry Yu; Jagath C. Rajapakse (EMBC, 2011)

PANI: an interactive data-driven tool for target prioritization in signaling networks. - Huey-Eng Chua; Sourav S. Bhowmick; Lisa Tucker-Kellogg; Yingqi Wang; C. Forbes Dewey Jr.; Hanry Yu (IHI, 2012)

In silico identification of endo16 regulators in the sea urchin endomesoderm gene regulatory network. - Huey-Eng Chua; Sourav S. Bhowmick; Lisa Tucker-Kellogg; Qing Zhao; C. Forbes Dewey Jr.; Hanry Yu (IHI, 2012)

FUSE: a system for data-driven multi-level functional summarization of protein interaction networks. - Boon-Siew Seah; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Hanry Yu (IHI, 2012)

FUSE: a profit maximization approach for functional summarization of biological networks. - Boon-Siew Seah; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Hanry Yu (BMC Bioinform., 2012)

The Self-Limiting Dynamics of TGF-β Signaling In Silico and In Vitro, with Negative Feedback through PPM1A Upregulation. - Junjie Wang; Lisa Tucker-Kellogg; Inn Chuan Ng; Ruirui Jia; P. S. Thiagarajan; Jacob K. White 001; Hanry Yu (PLoS Comput. Biol., 2014)

Computational analysis reveals the coupling between bistability and the sign of a feedback loop in a TGF-β1 activation model. - Huipeng Li; Lakshmi Venkatraman; Balakrishnan Chakrapani Narmada; Jacob K. White 001; Hanry Yu; Lisa Tucker-Kellogg (BMC Syst. Biol., 2017)

A Multitask Framework for Label Refinement and Lesion Segmentation in Clinical Brain Imaging. - Yang Yu 079; Jiahao Wang; Ashish Jith Sreejith Kumar; Bryan Tan; Navya Vanjavaka; Nurul Hafidzah Rahim; Alistair Koh; Shaheen Low; Yih Yian Sitoh; Hanry Yu; Pavitra Krishnaswamy; Ivan Ho Mien (MILLanD@MICCAI, 2023)

Dual Prototypical Self-Supervised Learning for One-shot Medical Image Segmentation. - Ziyuan Zhao; Zhi Qing Ng; Zhongyao Cheng; Jiahao Wang; Xulei Yang; Hanry Yu; Cuntai Guan (EMBC, 2024)

sqFibrosis: A Robust Liver Fibrosis Scoring System for Telepathology. - Yang Yu 079; Jiahao Wang; Hanry Yu (ISBI, 2024)