Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3' untranslated region. - Hao Chen 007; Burt M. Sharp (BMC Bioinform., 2002)

Content-rich biological network constructed by mining PubMed abstracts. - Hao Chen 007; Burt M. Sharp (BMC Bioinform., 2004)

Evaluating statistical learning methods for cell type classification and feature selection using RNA-seq data. - Hao Chen 007 (BMC Bioinform., 2014)

Establishing a protocol for single cell transcriptome sequencing of the rat brain. - Hao Chen 007; Burt M. Sharp (BMC Bioinform., 2014)

Differences in gene expression profiles between individual islets from case #6213. - Nataliya I. Lenchik; Hao Chen 007; Dorothy N. Kakoola; Ivan Gerling (BMC Bioinform., 2014)

Classification of Neurodevelopmental Age in Normal Infants Using 3D-CNN based on Brain MRI. - Mahdieh Shabanian; Eugene C. Eckstein; Hao Chen 007; John P. DeVincenzo (BIBM, 2019)

Neurodevelopmental Age Estimation of Infants Using a 3D-Convolutional Neural Network Model based on Fusion MRI Sequences. - Mahdieh Shabanian; Adeel Siddiqui; Hao Chen 007; John P. DeVincenzo (CoRR, 2020)

Detecting retinal neural and stromal cell classes and ganglion cell subtypes based on transcriptome data with deep transfer learning. - Yeganeh Madadi; Jian Sun; Hao Chen 007; Robert W. Williams; Siamak Yousefi (Bioinform., 2022)

Using Large Language Models to Automate Category and Trend Analysis of Scientific Articles: An Application in Ophthalmology. - Hina Raja; Asim Munawar; Mohammad Delsoz; Mohammad Elahi; Yeganeh Madadi; Amr Hassan; Hashem Abu Serhan; Onur Inam; Luis Hermandez; Sang Tran; Wuqas Munir; Alaa A. Abd-alrazaq; et al. (CoRR, 2023)

Artificial Intelligence Models for Cell Type and Subtype Identification Based on Single-Cell RNA Sequencing Data in Vision Science. - Yeganeh Madadi; Aboozar Monavarfeshani; Hao Chen 007; W. Daniel Stamer; Robert W. Williams; Siamak Yousefi (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)