Synergistic Allosteric Mechanism of Fructose-1, 6-bisphosphate and Serine for Pyruvate Kinase M2 via Dynamics Fluctuation Network Analysis. - Jingxu Yang; Hao Liu 081; Xiaorui Liu; Chengbo Gu; Ray Luo 001; Hai-Feng Chen (J. Chem. Inf. Model., 2016)

Allosteric Autoinhibition Pathway in Transcription Factor ERG: Dynamics Network and Mutant Experimental Evaluations. - Wei Ye; Tianle Qian; Hao Liu 081; Ray Luo 001; Hai-Feng Chen (J. Chem. Inf. Model., 2017)

Inhibitory mechanism of 5-bromo-3-indoleacetic acid for non-structural-3 helicase hepatitis C virus with dynamics correlation network analysis. - Mueed Ur Rahman; Ashfaq Ur Rehman; Hao Liu 081; Hai-Feng Chen (Comput. Biol. Chem., 2018)

Exploring the Pyrazinamide Drug Resistance Mechanism of Clinical Mutants T370P and W403G in Ribosomal Protein S1 ofMycobacterium tuberculosis. - Ashfaq Ur Rehman; Muhammad Tahir Khan; Hao Liu 081; Abdul Wadood; Shaukat Iqbal Malik; Hai-Feng Chen (J. Chem. Inf. Model., 2019)

Gain-of-Function SHP2 E76Q Mutant Rescuing Autoinhibition Mechanism Associated with Juvenile Myelomonocytic Leukemia. - Ashfaq Ur Rehman; Humaira Rafiq; Mueed Ur Rahman; Jiayi Li; Hao Liu 081; Shenggan Luo; Taaha Arshad; Abdul Wadood; Hai-Feng Chen (J. Chem. Inf. Model., 2019)

Residue-Specific Force Field Improving the Sample of Intrinsically Disordered Proteins and Folded Proteins. - Sheng Yang; Hao Liu 081; Yangpeng Zhang; Hui Lu 004; Hai-Feng Chen (J. Chem. Inf. Model., 2019)

Comparison and Evaluation of Force Fields for Intrinsically Disordered Proteins. - Mueed Ur Rahman; Ashfaq Ur Rehman; Hao Liu 081; Hai-Feng Chen (J. Chem. Inf. Model., 2020)

Environment-Specific Force Field for Intrinsically Disordered and Ordered Proteins. - Dong Song; Hao Liu 081; Ray Luo 001; Hai-Feng Chen (J. Chem. Inf. Model., 2020)

Recent Force Field Strategies for Intrinsically Disordered Proteins. - Junxi Mu; Hao Liu 081; Jian Zhang 037; Ray Luo 001; Hai-Feng Chen (J. Chem. Inf. Model., 2021)

RNA-Specific Force Field Optimization with CMAP and Reweighting. - Jun Chen; Hao Liu 081; Xiaochen Cui; Zhengxin Li; Hai-Feng Chen (J. Chem. Inf. Model., 2022)

Polarizable Force Field of Intrinsically Disordered Proteins with CMAP and Reweighting Optimization. - Xiaochen Cui; Hao Liu 081; Hai-Feng Chen (J. Chem. Inf. Model., 2022)

Personal Precise Force Field for Intrinsically Disordered and Ordered Proteins Based on Deep Learning. - Xiaoyue Ji; Hao Liu 081; Yangpeng Zhang; Jun Chen; Hai-Feng Chen (J. Chem. Inf. Model., 2023)

SAM-DTA: a sequence-agnostic model for drug-target binding affinity prediction. - Zhiqiang Hu; Wenfeng Liu; Chenbin Zhang; Jiawen Huang; Shaoting Zhang 001; Huiqun Yu; Yi Xiong 002; Hao Liu 081; Song Ke; Liang Hong (Briefings Bioinform., 2023)