MixProTool: A Powerful and Comprehensive Web Tool for Analyzing and Visualizing Multigroup Proteomics Data. - Shisheng Wang; Wen Zheng; Liqiang Hu; Meng Gong; Hao Yang 035 (J. Comput. Biol., 2018)

MSpectraAI: a powerful platform for deciphering proteome profiling of multi-tumor mass spectrometry data by using deep neural networks. - Shisheng Wang; Hongwen Zhu; Hu Zhou; Jingqiu Cheng; Hao Yang 035 (BMC Bioinform., 2020)

EnrichVisBox: A Versatile and Powerful Web Toolbox for Visualizing Complex Functional Enrichment Results of Omics Data. - Shisheng Wang; Yi Zhong; Jingqiu Cheng; Hao Yang 035 (J. Comput. Biol., 2021)

DEWNA: dynamic entropy weight network analysis and its application to the DNA-binding proteome in A549 cells with cisplatin-induced damage. - Shisheng Wang; Wenjuan Zeng; Yin Yang; Jingqiu Cheng; Dan Liu; Hao Yang 035 (Briefings Bioinform., 2024)