DualGCN: a dual graph convolutional network model to predict cancer drug response. - Tianxing Ma; Qiao Liu 008; Haochen Li 003; Mu Zhou; Rui Jiang 001; Xuegong Zhang (BMC Bioinform., 2022)

Decoding functional cell-cell communication events by multi-view graph learning on spatial transcriptomics. - Haochen Li 003; Tianxing Ma; Minsheng Hao; Wenbo Guo 010; Jin Gu; Xuegong Zhang; Lei Wei (Briefings Bioinform., 2023)

NeoHunter: Flexible software for systematically detecting neoantigens from sequencing data. - Tianxing Ma; Zetong Zhao; Haochen Li 003; Lei Wei; Xuegong Zhang (Quant. Biol., 2024)