Meta-eQTL: a tool set for flexible eQTL meta-analysis. - Antonio Di Narzo; Haoxiang Cheng; Jianwei Lu; Ke Hao (BMC Bioinform., 2014)

LLM4HIN: Discovering Meta-path with Large Language Model for Reasoning on Complex Heterogeneous Information Networks. - Haoxiang Cheng; Shixuan Liu; Changjun Fan; Kuihua Huang; Hua He; Xianghan Wang; Zhong Liu 002 (iThings/GreenCom/CPSCom/SmartData/Cybermatics, 2024)

EvoPath: Evolutionary meta-path discovery with large language models for complex heterogeneous information networks. - Shixuan Liu; Haoxiang Cheng; Yunfei Wang; Yue He 001; Changjun Fan; Zhong Liu 002 (Inf. Process. Manag., 2025)

Rule Learning for Knowledge Graph Reasoning under Agnostic Distribution Shift. - Shixuan Liu; Yue He 001; Yunfei Wang; Hao Zou 001; Haoxiang Cheng; Wenjing Yang 002; Peng Cui 001; Zhong Liu 002 (CoRR, 2025)